Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4057 and GFF4058 overlap by 4 nucleotides GFF4058 and GFF4059 are separated by 137 nucleotides GFF4059 and GFF4060 are separated by 263 nucleotides
GFF4057 - Copper/silver efflux RND transporter, membrane fusion protein CusB, at 269,944 to 271,647
GFF4057
GFF4058 - Copper/silver efflux RND transporter, outer membrane protein CusC, at 271,644 to 272,999
GFF4058
GFF4059 - hypothetical protein, at 273,137 to 273,583
GFF4059
GFF4060 - hypothetical protein, at 273,847 to 274,296
GFF4060
Position (kb) 271
272
273 Strain fitness (log2 ratio) -2
-1
0
1 at 271.371 kb on - strand, within GFF4057 at 271.577 kb on + strand at 271.577 kb on + strand at 271.578 kb on - strand at 271.578 kb on - strand at 271.900 kb on + strand, within GFF4058 at 271.900 kb on + strand, within GFF4058 at 272.055 kb on + strand, within GFF4058 at 272.120 kb on - strand, within GFF4058 at 272.120 kb on - strand, within GFF4058 at 272.123 kb on + strand, within GFF4058 at 272.123 kb on + strand, within GFF4058 at 272.123 kb on + strand, within GFF4058 at 272.123 kb on + strand, within GFF4058 at 272.522 kb on - strand, within GFF4058 at 272.577 kb on - strand, within GFF4058 at 272.727 kb on + strand, within GFF4058 at 272.728 kb on - strand, within GFF4058 at 272.728 kb on - strand, within GFF4058 at 273.024 kb on + strand at 273.258 kb on + strand, within GFF4059 at 273.259 kb on - strand, within GFF4059 at 273.259 kb on - strand, within GFF4059 at 273.425 kb on + strand, within GFF4059 at 273.454 kb on + strand, within GFF4059 at 273.455 kb on - strand, within GFF4059 at 273.455 kb on - strand, within GFF4059 at 273.455 kb on - strand, within GFF4059 at 273.505 kb on - strand, within GFF4059 at 273.733 kb on + strand at 273.948 kb on - strand, within GFF4060
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 271,371 - GFF4057 0.84 -0.3 271,577 + -0.7 271,577 + -0.7 271,578 - -0.1 271,578 - +0.1 271,900 + GFF4058 0.19 -0.2 271,900 + GFF4058 0.19 +0.4 272,055 + GFF4058 0.30 +0.3 272,120 - GFF4058 0.35 +0.2 272,120 - GFF4058 0.35 +0.8 272,123 + GFF4058 0.35 -1.2 272,123 + GFF4058 0.35 -0.1 272,123 + GFF4058 0.35 -0.2 272,123 + GFF4058 0.35 +0.1 272,522 - GFF4058 0.65 +0.8 272,577 - GFF4058 0.69 +0.8 272,727 + GFF4058 0.80 -1.6 272,728 - GFF4058 0.80 +0.3 272,728 - GFF4058 0.80 -0.1 273,024 + +0.2 273,258 + GFF4059 0.27 +0.5 273,259 - GFF4059 0.27 +0.1 273,259 - GFF4059 0.27 -0.0 273,425 + GFF4059 0.64 -0.0 273,454 + GFF4059 0.71 -0.0 273,455 - GFF4059 0.71 +0.6 273,455 - GFF4059 0.71 -1.9 273,455 - GFF4059 0.71 -0.1 273,505 - GFF4059 0.82 -0.5 273,733 + +0.3 273,948 - GFF4060 0.22 +0.5
Or see this region's nucleotide sequence