Strain Fitness in Variovorax sp. SCN45 around GFF3165

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
603,281	+		GFF3164	0.13	-0.5
603,282	-		GFF3164	0.13	-0.9
603,282	-		GFF3164	0.13	+0.2
603,569	+		GFF3164	0.42	-0.2
603,569	+		GFF3164	0.42	-0.2
603,654	-		GFF3164	0.51	-1.6
603,732	-		GFF3164	0.59	-0.5
603,798	-		GFF3164	0.66	-1.3
604,966	+		GFF3165	0.48	-1.6
604,966	+		GFF3165	0.48	-0.2
605,219	+		GFF3165	0.63	-0.7
605,770	+				-1.7
605,771	-				+0.2
605,876	-				+0.3
605,882	-				-0.0
605,882	-				-0.7
605,882	-				-1.5
605,882	-				-1.0
605,923	-				-1.0
605,923	-				-1.6
605,923	-				-0.8
605,923	-				-0.1
606,308	-		GFF3166	0.41	-0.2
606,347	-		GFF3166	0.46	-0.2