Strain Fitness in Variovorax sp. SCN45 around GFF3051

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
484,893	+				-0.0
484,894	-				+0.4
484,924	+				-0.3
484,925	-				-1.9
484,957	+				+0.3
485,015	+				-0.4
485,016	-				+0.2
485,037	+				-1.7
485,037	+				-1.3
485,038	-				-0.7
485,038	-				-0.6
485,051	-				-0.0
485,575	+		GFF3050	0.65	-0.9
485,584	+		GFF3050	0.66	-1.3
485,894	-				+0.5
486,235	+				-0.5
486,789	+		GFF3052	0.41	-0.3
486,789	+		GFF3052	0.41	-0.1
486,789	+		GFF3052	0.41	-0.8
486,789	+		GFF3052	0.41	-0.2
486,790	-		GFF3052	0.41	-0.8
486,790	-		GFF3052	0.41	-0.9