Strain Fitness in Variovorax sp. SCN45 around GFF2701

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
127,423	+		GFF2699	0.50	-2.1
127,489	+		GFF2699	0.70	-1.1
127,511	-		GFF2699	0.76	-0.4
127,511	-		GFF2699	0.76	-0.8
127,597	-				+0.8
127,620	-				+0.4
128,741	-		GFF2701	0.30	-1.4
129,184	+		GFF2701	0.68	-0.5
129,184	+		GFF2701	0.68	-0.4
129,184	+		GFF2701	0.68	-1.0
129,856	-		GFF2702	0.22	+0.1
129,858	+		GFF2702	0.22	-0.1
129,859	-		GFF2702	0.22	-2.8
129,859	-		GFF2702	0.22	-1.4
129,862	-		GFF2702	0.22	-0.6
129,862	-		GFF2702	0.22	+0.4
129,930	+		GFF2702	0.27	-1.0
130,296	+		GFF2702	0.53	-0.3
130,297	-		GFF2702	0.54	+2.2
130,297	-		GFF2702	0.54	-0.2
130,297	-		GFF2702	0.54	-1.1