Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2671 and GFF2672 are separated by 11 nucleotides GFF2672 and GFF2673 overlap by 1 nucleotides GFF2673 and GFF2674 overlap by 4 nucleotides
GFF2671 - Domain of unknown function / Efflux ABC transporter, permease protein, at 93,134 to 94,291
GFF2671
GFF2672 - ABC transporter, ATP-binding protein, at 94,303 to 95,211
GFF2672
GFF2673 - FIG00655207: hypothetical protein, at 95,211 to 96,191
GFF2673
GFF2674 - FIG00653968: hypothetical protein, at 96,188 to 96,583
GFF2674
Position (kb) 94
95
96 Strain fitness (log2 ratio) -1
0
1 at 93.362 kb on + strand, within GFF2671 at 93.362 kb on + strand, within GFF2671 at 93.362 kb on + strand, within GFF2671 at 93.363 kb on - strand, within GFF2671 at 94.011 kb on + strand, within GFF2671 at 94.011 kb on + strand, within GFF2671 at 94.012 kb on - strand, within GFF2671 at 94.012 kb on - strand, within GFF2671 at 94.012 kb on - strand, within GFF2671 at 94.140 kb on + strand, within GFF2671 at 94.140 kb on + strand, within GFF2671 at 94.141 kb on - strand, within GFF2671 at 94.141 kb on - strand, within GFF2671 at 94.167 kb on + strand, within GFF2671 at 94.167 kb on + strand, within GFF2671 at 94.167 kb on + strand, within GFF2671 at 94.168 kb on - strand, within GFF2671 at 94.168 kb on - strand, within GFF2671 at 94.168 kb on - strand, within GFF2671 at 94.168 kb on - strand, within GFF2671 at 94.634 kb on + strand, within GFF2672 at 94.634 kb on + strand, within GFF2672 at 94.634 kb on + strand, within GFF2672 at 94.635 kb on - strand, within GFF2672 at 94.635 kb on - strand, within GFF2672 at 94.646 kb on + strand, within GFF2672 at 94.647 kb on - strand, within GFF2672 at 94.647 kb on - strand, within GFF2672 at 94.647 kb on - strand, within GFF2672 at 94.647 kb on - strand, within GFF2672 at 94.950 kb on - strand, within GFF2672 at 95.180 kb on + strand at 95.441 kb on - strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.680 kb on + strand, within GFF2673 at 95.681 kb on - strand, within GFF2673 at 95.681 kb on - strand, within GFF2673 at 95.785 kb on + strand, within GFF2673 at 95.785 kb on + strand, within GFF2673 at 95.807 kb on - strand, within GFF2673 at 95.807 kb on - strand, within GFF2673 at 95.857 kb on + strand, within GFF2673 at 95.869 kb on + strand, within GFF2673 at 95.869 kb on + strand, within GFF2673 at 96.064 kb on + strand, within GFF2673 at 96.064 kb on + strand, within GFF2673
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 93,362 + GFF2671 0.20 -1.3 93,362 + GFF2671 0.20 -0.3 93,362 + GFF2671 0.20 -0.1 93,363 - GFF2671 0.20 +0.5 94,011 + GFF2671 0.76 +0.8 94,011 + GFF2671 0.76 -0.8 94,012 - GFF2671 0.76 +0.1 94,012 - GFF2671 0.76 -0.7 94,012 - GFF2671 0.76 +0.0 94,140 + GFF2671 0.87 +0.5 94,140 + GFF2671 0.87 -0.6 94,141 - GFF2671 0.87 +0.9 94,141 - GFF2671 0.87 +1.5 94,167 + GFF2671 0.89 +0.1 94,167 + GFF2671 0.89 -0.2 94,167 + GFF2671 0.89 +1.2 94,168 - GFF2671 0.89 -0.0 94,168 - GFF2671 0.89 -1.3 94,168 - GFF2671 0.89 +0.9 94,168 - GFF2671 0.89 +0.2 94,634 + GFF2672 0.36 -0.4 94,634 + GFF2672 0.36 -0.1 94,634 + GFF2672 0.36 -0.2 94,635 - GFF2672 0.37 +0.1 94,635 - GFF2672 0.37 -0.5 94,646 + GFF2672 0.38 -0.5 94,647 - GFF2672 0.38 +0.5 94,647 - GFF2672 0.38 -1.6 94,647 - GFF2672 0.38 -0.5 94,647 - GFF2672 0.38 -0.0 94,950 - GFF2672 0.71 -1.4 95,180 + -0.7 95,441 - GFF2673 0.23 -0.5 95,680 + GFF2673 0.48 -0.6 95,680 + GFF2673 0.48 -1.7 95,680 + GFF2673 0.48 -1.7 95,680 + GFF2673 0.48 -0.6 95,680 + GFF2673 0.48 -0.9 95,680 + GFF2673 0.48 -0.5 95,680 + GFF2673 0.48 -0.0 95,680 + GFF2673 0.48 -0.4 95,680 + GFF2673 0.48 -0.6 95,681 - GFF2673 0.48 -0.1 95,681 - GFF2673 0.48 +0.3 95,785 + GFF2673 0.59 +0.8 95,785 + GFF2673 0.59 +1.5 95,807 - GFF2673 0.61 -0.2 95,807 - GFF2673 0.61 +0.2 95,857 + GFF2673 0.66 +0.4 95,869 + GFF2673 0.67 -0.0 95,869 + GFF2673 0.67 +0.8 96,064 + GFF2673 0.87 -0.1 96,064 + GFF2673 0.87 +0.6
Or see this region's nucleotide sequence