Strain Fitness in Variovorax sp. SCN45 around GFF2196

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
255,882	+		GFF2195	0.79	-0.7
255,882	+		GFF2195	0.79	-0.5
255,882	+		GFF2195	0.79	-0.1
255,883	-		GFF2195	0.79	-1.3
256,159	-		GFF2195	0.88	+0.0
256,159	-		GFF2195	0.88	+0.1
256,160	-		GFF2195	0.88	-0.4
256,553	+				-0.5
256,785	+		GFF2196	0.41	+0.3
256,785	+		GFF2196	0.41	+0.9
256,786	-		GFF2196	0.41	-0.7
256,786	-		GFF2196	0.41	-0.4
256,786	-		GFF2196	0.41	-0.3
256,786	-		GFF2196	0.41	-0.2
256,786	-		GFF2196	0.41	-0.8
256,833	+		GFF2196	0.73	-0.5
256,834	-		GFF2196	0.74	+0.6
256,855	-		GFF2196	0.88	+1.5
257,082	+		GFF2197	0.10	-0.4
257,083	-		GFF2197	0.10	+1.8
257,083	-		GFF2197	0.10	-0.1
257,307	+		GFF2197	0.23	+1.8
257,307	+		GFF2197	0.23	-0.7
257,307	+		GFF2197	0.23	+1.5
257,308	-		GFF2197	0.23	-0.2
257,308	-		GFF2197	0.23	-1.4
257,625	+		GFF2197	0.40	+0.9
257,626	-		GFF2197	0.40	-0.2
257,626	-		GFF2197	0.40	-0.9