Strain Fitness in Variovorax sp. SCN45 around GFF1585

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
182,876	+		GFF1584	0.10	-0.5
183,246	+		GFF1584	0.53	-1.1
183,247	-		GFF1584	0.53	+0.7
183,301	-		GFF1584	0.59	-1.0
183,301	-		GFF1584	0.59	-1.3
183,442	-		GFF1584	0.75	-2.4
183,442	-		GFF1584	0.75	-0.1
183,442	-		GFF1584	0.75	-0.0
183,612	+				-0.5
183,612	+				-0.8
183,663	-				-0.4
183,663	-				-0.6
184,294	-		GFF1585	0.38	+0.2
184,395	+		GFF1585	0.46	-3.1
184,396	-		GFF1585	0.46	-0.5
184,396	-		GFF1585	0.46	+0.4
184,396	-		GFF1585	0.46	-0.9
184,425	+		GFF1585	0.49	-0.1
184,426	-		GFF1585	0.49	-0.6
184,426	-		GFF1585	0.49	+0.0
184,440	+		GFF1585	0.50	-0.2
184,441	-		GFF1585	0.50	-1.2
184,441	-		GFF1585	0.50	+0.1
184,441	-		GFF1585	0.50	+0.6
184,596	+		GFF1585	0.63	-0.2
184,596	+		GFF1585	0.63	+0.0
184,597	-		GFF1585	0.63	+0.1
184,648	-		GFF1585	0.67	+0.3
184,727	+		GFF1585	0.74	+0.3
184,728	-		GFF1585	0.74	-0.6
184,806	+		GFF1585	0.80	+0.2
184,807	-		GFF1585	0.80	-1.3
184,807	-		GFF1585	0.80	-0.4
184,821	+		GFF1585	0.81	-0.1
184,884	+		GFF1585	0.86	+0.2
184,884	+		GFF1585	0.86	+0.4
184,885	-		GFF1585	0.87	-0.1
184,885	-		GFF1585	0.87	+0.0
184,885	-		GFF1585	0.87	+0.2
184,917	+		GFF1585	0.89	+0.3
184,917	+		GFF1585	0.89	-0.3
184,918	-		GFF1585	0.89	-0.3
185,020	-				+0.5
185,212	+		GFF1586	0.15	-0.6
185,404	+		GFF1586	0.34	-1.1
185,404	+		GFF1586	0.34	-0.5
185,549	+		GFF1586	0.48	-0.3
185,550	-		GFF1586	0.48	-1.7