Strain Fitness in Escherichia coli ECRC62 around BNILDI_18500

Experiment: JK38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK38
3,725,194	+	yciE	BNILDI_18490	0.34	+0.3
3,725,266	+	yciE	BNILDI_18490	0.48	+0.1
3,725,403	+	yciE	BNILDI_18490	0.76	+0.8
3,725,404	-	yciE	BNILDI_18490	0.76	-0.3
3,726,085	-				+0.4
3,726,162	+				-0.0
3,726,162	+				+0.4
3,726,185	-				+0.8
3,726,245	+	ompW	BNILDI_18500	0.17	-0.0
3,726,246	-	ompW	BNILDI_18500	0.17	-0.9
3,726,287	+	ompW	BNILDI_18500	0.24	-1.6
3,726,287	+	ompW	BNILDI_18500	0.24	-1.1
3,726,395	+	ompW	BNILDI_18500	0.41	-1.1
3,726,396	-	ompW	BNILDI_18500	0.41	+0.6
3,726,400	-	ompW	BNILDI_18500	0.41	-1.2
3,726,577	-	ompW	BNILDI_18500	0.69	-0.5
3,726,579	-	ompW	BNILDI_18500	0.69	-1.0
3,726,579	-	ompW	BNILDI_18500	0.69	-1.0
3,726,583	-	ompW	BNILDI_18500	0.70	-0.0
3,726,643	-	ompW	BNILDI_18500	0.79	-0.1
3,726,667	+	ompW	BNILDI_18500	0.83	-0.6
3,726,795	+				-0.4
3,726,818	+				-0.1
3,726,845	+				-0.3
3,726,845	+				+1.1
3,726,856	-				+0.6
3,727,034	+				+0.8
3,727,034	+				+0.2
3,727,047	-				-0.5
3,727,101	+				+0.1
3,727,102	-				+0.1
3,727,113	-				-0.2
3,727,113	-				+1.3
3,727,216	+	yciC	BNILDI_18505	0.11	-1.0
3,727,310	+	yciC	BNILDI_18505	0.24	-1.1
3,727,484	+	yciC	BNILDI_18505	0.47	-0.5
3,727,485	-	yciC	BNILDI_18505	0.48	-0.0
3,727,586	+	yciC	BNILDI_18505	0.61	+0.6
3,727,667	+	yciC	BNILDI_18505	0.72	-0.7