Strain Fitness in Escherichia coli ECRC62 around BNILDI_13775

Experiment: JK38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK38
2,770,176	-	napB	BNILDI_13765	0.40	+2.6
2,770,294	+	napB	BNILDI_13765	0.66	-0.1
2,770,358	+	napB	BNILDI_13765	0.80	-0.6
2,770,445	+				+0.6
2,770,631	-	napC	BNILDI_13770	0.29	-0.1
2,770,667	+	napC	BNILDI_13770	0.35	-1.9
2,770,667	+	napC	BNILDI_13770	0.35	-1.4
2,770,667	+	napC	BNILDI_13770	0.35	+0.8
2,770,667	+	napC	BNILDI_13770	0.35	+0.6
2,770,668	-	napC	BNILDI_13770	0.35	-0.1
2,770,668	-	napC	BNILDI_13770	0.35	+0.7
2,770,788	-	napC	BNILDI_13770	0.55	+0.3
2,770,883	-	napC	BNILDI_13770	0.71	+0.4
2,770,921	+	napC	BNILDI_13770	0.77	+1.2
2,770,922	-	napC	BNILDI_13770	0.77	+0.2
2,770,993	+	napC	BNILDI_13770	0.89	-0.5
2,771,066	+				-1.1
2,771,097	+				-0.5
2,771,098	-				-0.7
2,771,098	-				-0.4
2,771,098	-				-0.9
2,771,124	+				-0.5
2,771,124	+				-0.5
2,771,124	+				+0.3
2,771,128	+				+0.6
2,771,143	+	ccmA	BNILDI_13775	0.11	-0.4
2,771,292	-	ccmA	BNILDI_13775	0.35	-0.6
2,771,440	+	ccmA	BNILDI_13775	0.59	-1.3
2,771,441	-	ccmA	BNILDI_13775	0.59	-1.3
2,771,441	-	ccmA	BNILDI_13775	0.59	+1.0
2,771,581	+	ccmA	BNILDI_13775	0.81	-1.4
2,771,594	-	ccmA	BNILDI_13775	0.83	-1.6
2,771,730	-				+0.0
2,771,783	+	ccmB	BNILDI_13780	0.14	-0.1
2,771,783	+	ccmB	BNILDI_13780	0.14	-0.1
2,771,784	-	ccmB	BNILDI_13780	0.14	+0.6
2,771,784	-	ccmB	BNILDI_13780	0.14	+2.2
2,771,850	+	ccmB	BNILDI_13780	0.24	+0.2
2,772,044	+	ccmB	BNILDI_13780	0.53	+2.6
2,772,061	+	ccmB	BNILDI_13780	0.56	+0.5
2,772,154	-	ccmB	BNILDI_13780	0.70	-0.7
2,772,207	-	ccmB	BNILDI_13780	0.78	+1.6
2,772,308	+				+1.1
2,772,309	-				+0.6
2,772,395	+				+2.4
2,772,460	+				+0.3
2,772,552	-	ccmC	BNILDI_13785	0.21	+0.2
2,772,564	-	ccmC	BNILDI_13785	0.23	+0.8
2,772,567	+	ccmC	BNILDI_13785	0.23	+0.1
2,772,606	+	ccmC	BNILDI_13785	0.28	-0.2
2,772,606	+	ccmC	BNILDI_13785	0.28	-2.4
2,772,607	-	ccmC	BNILDI_13785	0.29	-0.1
2,772,607	-	ccmC	BNILDI_13785	0.29	+0.0
2,772,607	-	ccmC	BNILDI_13785	0.29	-0.3
2,772,632	+	ccmC	BNILDI_13785	0.32	+0.1