Strain Fitness in Escherichia coli ECRC62 around BNILDI_13065

Experiment: JK38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK38
2,616,357	-	gtrB	BNILDI_13055	0.53	-4.8
2,616,357	-	gtrB	BNILDI_13055	0.53	-2.4
2,616,374	-	gtrB	BNILDI_13055	0.55	-3.8
2,616,375	+	gtrB	BNILDI_13055	0.55	-1.7
2,616,376	-	gtrB	BNILDI_13055	0.55	-1.4
2,616,376	-	gtrB	BNILDI_13055	0.55	-3.0
2,616,376	-	gtrB	BNILDI_13055	0.55	-5.0
2,616,446	-	gtrB	BNILDI_13055	0.63	-1.0
2,616,574	+	gtrB	BNILDI_13055	0.77	-4.1
2,616,608	+	gtrB	BNILDI_13055	0.80	-3.5
2,616,628	+	gtrB	BNILDI_13055	0.83	-3.2
2,616,637	+	gtrB	BNILDI_13055	0.84	-1.0
2,616,637	+	gtrB	BNILDI_13055	0.84	-3.0
2,616,694	-	gtrB	BNILDI_13055	0.90	+2.6
2,616,720	-				-1.2
2,616,780	-				-3.8
2,616,889	-		BNILDI_13060	0.29	+1.6
2,616,889	-		BNILDI_13060	0.29	-3.2
2,616,889	-		BNILDI_13060	0.29	-5.0
2,616,889	-		BNILDI_13060	0.29	-1.0
2,616,938	+		BNILDI_13060	0.42	-1.2
2,616,938	+		BNILDI_13060	0.42	-1.2
2,616,939	-		BNILDI_13060	0.43	-3.8
2,616,939	-		BNILDI_13060	0.43	-1.2
2,616,939	-		BNILDI_13060	0.43	-4.5
2,616,939	-		BNILDI_13060	0.43	-4.2
2,616,941	-		BNILDI_13060	0.43	-2.6
2,616,941	-		BNILDI_13060	0.43	-5.8
2,616,941	-		BNILDI_13060	0.43	-5.2
2,616,941	-		BNILDI_13060	0.43	-2.3
2,616,941	-		BNILDI_13060	0.43	-2.1
2,616,941	-		BNILDI_13060	0.43	-3.1
2,616,941	-		BNILDI_13060	0.43	+0.6
2,617,065	-		BNILDI_13060	0.77	-2.5
2,617,068	+		BNILDI_13060	0.78	-0.4
2,617,069	-		BNILDI_13060	0.79	+0.6
2,617,072	+		BNILDI_13060	0.79	-0.4
2,617,073	-		BNILDI_13060	0.80	-3.1
2,617,073	-		BNILDI_13060	0.80	-1.7
2,617,073	-		BNILDI_13060	0.80	-3.9
2,617,073	-		BNILDI_13060	0.80	-3.1
2,617,073	-		BNILDI_13060	0.80	-2.2
2,617,094	-		BNILDI_13060	0.85	-3.8
2,617,094	-		BNILDI_13060	0.85	-5.7
2,617,094	-		BNILDI_13060	0.85	-1.2
2,617,094	-		BNILDI_13060	0.85	-0.1
2,617,095	+		BNILDI_13060	0.86	-5.7
2,617,096	-		BNILDI_13060	0.86	-5.7
2,617,096	-		BNILDI_13060	0.86	-6.3
2,617,154	-				-3.0
2,617,160	+				-4.9
2,617,164	-				-1.7
2,617,283	-				+0.2
2,617,377	+				+0.0
2,617,456	+	intS	BNILDI_13065	0.14	-1.2
2,617,457	-	intS	BNILDI_13065	0.14	+0.9
2,617,506	+	intS	BNILDI_13065	0.18	+0.1
2,617,562	-	intS	BNILDI_13065	0.23	+0.8
2,617,758	-	intS	BNILDI_13065	0.40	+0.2
2,617,918	+	intS	BNILDI_13065	0.54	+0.5
2,617,918	+	intS	BNILDI_13065	0.54	-0.8
2,617,920	+	intS	BNILDI_13065	0.54	-0.8
2,617,921	-	intS	BNILDI_13065	0.54	+0.0
2,617,921	-	intS	BNILDI_13065	0.54	-0.1
2,618,081	+	intS	BNILDI_13065	0.68	+2.2
2,618,082	-	intS	BNILDI_13065	0.68	+0.4
2,618,121	+	intS	BNILDI_13065	0.71	+0.9
2,618,261	-	intS	BNILDI_13065	0.83	+0.5
2,618,363	+				-0.4
2,618,364	-				+0.4
2,618,374	-				-0.1
2,618,374	-				+1.6
2,618,374	-				-0.5
2,618,670	-	Arg_trna	BNILDI_13070	0.71	-1.1
2,618,705	+				+0.4
2,618,733	+				-0.7
2,618,769	-				+0.5
2,619,050	-	yfdC	BNILDI_13075	0.30	-0.5
2,619,050	-	yfdC	BNILDI_13075	0.30	+0.6
2,619,050	-	yfdC	BNILDI_13075	0.30	+0.1
2,619,052	-	yfdC	BNILDI_13075	0.31	-0.3
2,619,052	-	yfdC	BNILDI_13075	0.31	+0.3
2,619,052	-	yfdC	BNILDI_13075	0.31	-0.4
2,619,099	+	yfdC	BNILDI_13075	0.36	-0.7
2,619,214	-	yfdC	BNILDI_13075	0.48	-0.3
2,619,214	-	yfdC	BNILDI_13075	0.48	-0.2
2,619,219	+	yfdC	BNILDI_13075	0.48	-0.3
2,619,219	+	yfdC	BNILDI_13075	0.48	-1.2
2,619,219	+	yfdC	BNILDI_13075	0.48	+0.6
2,619,220	-	yfdC	BNILDI_13075	0.49	+0.3
2,619,220	-	yfdC	BNILDI_13075	0.49	-0.6
2,619,221	+	yfdC	BNILDI_13075	0.49	-0.8
2,619,221	+	yfdC	BNILDI_13075	0.49	+1.1
2,619,243	+	yfdC	BNILDI_13075	0.51	+0.2
2,619,244	-	yfdC	BNILDI_13075	0.51	-1.6
2,619,262	-	yfdC	BNILDI_13075	0.53	-0.1
2,619,292	-	yfdC	BNILDI_13075	0.56	-0.0
2,619,296	-	yfdC	BNILDI_13075	0.57	-0.7
2,619,365	-	yfdC	BNILDI_13075	0.64	-0.7
2,619,382	+	yfdC	BNILDI_13075	0.66	-0.7
2,619,394	-	yfdC	BNILDI_13075	0.67	+0.2
2,619,405	+	yfdC	BNILDI_13075	0.68	-0.5
2,619,406	-	yfdC	BNILDI_13075	0.68	+0.9
2,619,406	-	yfdC	BNILDI_13075	0.68	+0.3