Strain Fitness in Escherichia coli ECRC62 around BNILDI_09650

Experiment: JK38

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	JK38
1,943,736	+	mutY	BNILDI_09645	0.26	-1.8
1,943,737	-	mutY	BNILDI_09645	0.27	-0.4
1,943,737	-	mutY	BNILDI_09645	0.27	-0.7
1,943,778	+	mutY	BNILDI_09645	0.30	+2.5
1,943,778	+	mutY	BNILDI_09645	0.30	-0.7
1,943,778	+	mutY	BNILDI_09645	0.30	+0.9
1,943,779	-	mutY	BNILDI_09645	0.31	+0.5
1,943,885	+	mutY	BNILDI_09645	0.41	+0.2
1,943,885	+	mutY	BNILDI_09645	0.41	+0.2
1,943,886	-	mutY	BNILDI_09645	0.41	-0.4
1,943,970	-	mutY	BNILDI_09645	0.49	+1.2
1,944,018	+	mutY	BNILDI_09645	0.53	+0.7
1,944,064	+	mutY	BNILDI_09645	0.58	-0.6
1,944,065	-	mutY	BNILDI_09645	0.58	+0.7
1,944,213	+	mutY	BNILDI_09645	0.72	+0.6
1,944,263	-	mutY	BNILDI_09645	0.77	-0.5
1,944,266	-	mutY	BNILDI_09645	0.77	+0.1
1,944,344	+	mutY	BNILDI_09645	0.84	+0.1
1,944,460	+				+2.2
1,944,461	-				+0.4
1,944,617	+				+0.3
1,944,618	-				-0.9
1,944,618	-				+0.7
1,944,618	-				+0.2
1,944,661	+				+1.1
1,944,733	-				+0.4
1,944,790	+	trmB	BNILDI_09650	0.17	+0.3
1,944,825	+	trmB	BNILDI_09650	0.22	+0.7
1,944,826	-	trmB	BNILDI_09650	0.22	-0.4
1,944,826	-	trmB	BNILDI_09650	0.22	+0.2
1,944,826	-	trmB	BNILDI_09650	0.22	+1.2
1,945,004	+	trmB	BNILDI_09650	0.46	-0.5
1,945,050	+	trmB	BNILDI_09650	0.53	-0.3
1,945,051	-	trmB	BNILDI_09650	0.53	+0.2
1,945,123	-	trmB	BNILDI_09650	0.63	-0.6
1,945,163	+	trmB	BNILDI_09650	0.68	+0.0
1,945,220	-	trmB	BNILDI_09650	0.76	+0.8
1,945,230	+	trmB	BNILDI_09650	0.78	-0.7
1,945,230	+	trmB	BNILDI_09650	0.78	-0.1
1,945,230	+	trmB	BNILDI_09650	0.78	+1.3
1,945,231	-	trmB	BNILDI_09650	0.78	+1.0
1,945,231	-	trmB	BNILDI_09650	0.78	+0.7
1,945,263	+	trmB	BNILDI_09650	0.82	-1.3
1,945,288	+	trmB	BNILDI_09650	0.86	-0.1
1,945,367	+				+0.0
1,945,367	+				-1.0
1,945,368	-				+1.7
1,945,368	-				-0.5
1,945,387	+				+2.1
1,945,388	-				+1.3
1,945,388	-				+0.4
1,945,505	+	yggL	BNILDI_09655	0.35	+0.9
1,945,505	+	yggL	BNILDI_09655	0.35	-0.9
1,945,523	+	yggL	BNILDI_09655	0.41	-0.2
1,945,523	+	yggL	BNILDI_09655	0.41	-0.1
1,945,524	-	yggL	BNILDI_09655	0.41	-0.4
1,945,524	-	yggL	BNILDI_09655	0.41	-1.1
1,945,647	-	yggL	BNILDI_09655	0.79	+0.4
1,945,678	+	yggL	BNILDI_09655	0.88	+0.0
1,945,714	-				-0.9
1,945,723	+				-0.2
1,945,766	-				+0.2
1,945,812	+				+0.9
1,945,813	-				-0.5
1,945,898	+				+0.3
1,945,898	+				-0.1
1,945,898	+				-0.3
1,945,898	+				-0.3
1,945,898	+				+0.2
1,945,899	-				-0.4
1,945,899	-				-0.0
1,946,070	+	yggN	BNILDI_09660	0.24	-0.4
1,946,070	+	yggN	BNILDI_09660	0.24	-0.4
1,946,070	+	yggN	BNILDI_09660	0.24	-3.2
1,946,071	-	yggN	BNILDI_09660	0.24	+1.7
1,946,086	-	yggN	BNILDI_09660	0.26	-0.7
1,946,124	+	yggN	BNILDI_09660	0.31	-0.3
1,946,137	+	yggN	BNILDI_09660	0.33	+0.3
1,946,138	-	yggN	BNILDI_09660	0.33	+1.7
1,946,138	-	yggN	BNILDI_09660	0.33	-0.1
1,946,141	+	yggN	BNILDI_09660	0.34	-0.8
1,946,141	+	yggN	BNILDI_09660	0.34	-0.1
1,946,142	-	yggN	BNILDI_09660	0.34	-0.3
1,946,195	+	yggN	BNILDI_09660	0.41	+0.1
1,946,213	+	yggN	BNILDI_09660	0.44	+0.4
1,946,334	+	yggN	BNILDI_09660	0.60	-1.3
1,946,334	+	yggN	BNILDI_09660	0.60	+0.6
1,946,336	+	yggN	BNILDI_09660	0.61	+0.2
1,946,337	-	yggN	BNILDI_09660	0.61	+1.3