Experiment: JK38
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BNILDI_07625 and BNILDI_07630 are separated by 62 nucleotides BNILDI_07630 and nanS are separated by 211 nucleotides
BNILDI_07625: BNILDI_07625 - restriction endonuclease, at 1,523,065 to 1,524,375
_07625
BNILDI_07630: BNILDI_07630 - HNH endonuclease, at 1,524,438 to 1,525,310
_07630
BNILDI_07635: nanS - putative 9-O-acetyl-N-acetylneuraminic acid deacetylase, at 1,525,522 to 1,526,502
nanS
Position (kb) 1524
1525
1526 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1523.706 kb on - strand, within BNILDI_07625 at 1523.718 kb on - strand, within BNILDI_07625 at 1523.769 kb on + strand, within BNILDI_07625 at 1523.812 kb on + strand, within BNILDI_07625 at 1523.813 kb on - strand, within BNILDI_07625 at 1523.826 kb on - strand, within BNILDI_07625 at 1523.868 kb on + strand, within BNILDI_07625 at 1523.960 kb on - strand, within BNILDI_07625 at 1524.173 kb on - strand, within BNILDI_07625 at 1524.173 kb on - strand, within BNILDI_07625 at 1524.218 kb on - strand, within BNILDI_07625 at 1524.268 kb on - strand at 1524.417 kb on - strand at 1524.759 kb on + strand, within BNILDI_07630 at 1524.773 kb on - strand, within BNILDI_07630 at 1524.776 kb on + strand, within BNILDI_07630 at 1524.897 kb on + strand, within BNILDI_07630 at 1524.914 kb on + strand, within BNILDI_07630 at 1524.914 kb on + strand, within BNILDI_07630 at 1524.949 kb on + strand, within BNILDI_07630 at 1524.983 kb on - strand, within BNILDI_07630 at 1525.050 kb on + strand, within BNILDI_07630 at 1525.074 kb on + strand, within BNILDI_07630 at 1525.075 kb on - strand, within BNILDI_07630 at 1525.075 kb on - strand, within BNILDI_07630 at 1525.091 kb on + strand, within BNILDI_07630 at 1525.092 kb on - strand, within BNILDI_07630 at 1525.134 kb on + strand, within BNILDI_07630 at 1525.427 kb on + strand at 1525.480 kb on + strand at 1525.779 kb on + strand, within nanS at 1525.787 kb on + strand, within nanS at 1525.855 kb on - strand, within nanS at 1525.855 kb on - strand, within nanS at 1525.858 kb on - strand, within nanS at 1525.914 kb on + strand, within nanS at 1525.950 kb on + strand, within nanS at 1525.951 kb on + strand, within nanS at 1526.045 kb on + strand, within nanS at 1526.046 kb on - strand, within nanS at 1526.047 kb on + strand, within nanS at 1526.105 kb on + strand, within nanS at 1526.194 kb on + strand, within nanS at 1526.209 kb on - strand, within nanS at 1526.234 kb on + strand, within nanS at 1526.235 kb on - strand, within nanS at 1526.270 kb on + strand, within nanS
Per-strain Table
Position Strand Gene LocusTag Fraction JK38 remove 1,523,706 - BNILDI_07625 0.49 -0.6 1,523,718 - BNILDI_07625 0.50 -1.0 1,523,769 + BNILDI_07625 0.54 -1.0 1,523,812 + BNILDI_07625 0.57 +0.2 1,523,813 - BNILDI_07625 0.57 +2.2 1,523,826 - BNILDI_07625 0.58 -0.0 1,523,868 + BNILDI_07625 0.61 -0.2 1,523,960 - BNILDI_07625 0.68 -0.1 1,524,173 - BNILDI_07625 0.85 +0.1 1,524,173 - BNILDI_07625 0.85 -0.5 1,524,218 - BNILDI_07625 0.88 +0.5 1,524,268 - -0.7 1,524,417 - -0.9 1,524,759 + BNILDI_07630 0.37 -0.6 1,524,773 - BNILDI_07630 0.38 -0.1 1,524,776 + BNILDI_07630 0.39 -1.0 1,524,897 + BNILDI_07630 0.53 +1.4 1,524,914 + BNILDI_07630 0.55 +0.2 1,524,914 + BNILDI_07630 0.55 +2.2 1,524,949 + BNILDI_07630 0.59 -0.9 1,524,983 - BNILDI_07630 0.62 -1.0 1,525,050 + BNILDI_07630 0.70 +0.4 1,525,074 + BNILDI_07630 0.73 +0.4 1,525,075 - BNILDI_07630 0.73 +0.9 1,525,075 - BNILDI_07630 0.73 +0.5 1,525,091 + BNILDI_07630 0.75 -1.9 1,525,092 - BNILDI_07630 0.75 +1.0 1,525,134 + BNILDI_07630 0.80 +0.4 1,525,427 + +0.6 1,525,480 + +0.1 1,525,779 + nanS BNILDI_07635 0.26 -0.7 1,525,787 + nanS BNILDI_07635 0.27 -0.5 1,525,855 - nanS BNILDI_07635 0.34 +0.4 1,525,855 - nanS BNILDI_07635 0.34 -0.7 1,525,858 - nanS BNILDI_07635 0.34 +0.1 1,525,914 + nanS BNILDI_07635 0.40 -1.0 1,525,950 + nanS BNILDI_07635 0.44 -0.4 1,525,951 + nanS BNILDI_07635 0.44 -0.1 1,526,045 + nanS BNILDI_07635 0.53 -0.1 1,526,046 - nanS BNILDI_07635 0.53 +0.5 1,526,047 + nanS BNILDI_07635 0.54 -0.6 1,526,105 + nanS BNILDI_07635 0.59 -0.9 1,526,194 + nanS BNILDI_07635 0.69 +0.5 1,526,209 - nanS BNILDI_07635 0.70 +0.6 1,526,234 + nanS BNILDI_07635 0.73 -2.1 1,526,235 - nanS BNILDI_07635 0.73 +0.2 1,526,270 + nanS BNILDI_07635 0.76 -1.0
Or see this region's nucleotide sequence