Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5634 and GFF5635 are separated by 173 nucleotides GFF5635 and GFF5636 are separated by 44 nucleotides GFF5636 and GFF5637 overlap by 4 nucleotides GFF5637 and GFF5638 are separated by 34 nucleotides
GFF5634 - no description, at 11,120 to 11,296
GFF5634
GFF5635 - Molybdenum ABC transporter permease protein ModB, at 11,470 to 12,153
GFF5635
GFF5636 - Molybdenum ABC transporter, substrate-binding protein ModA, at 12,198 to 12,947
GFF5636
GFF5637 - Molybdenum ABC transporter ATP-binding protein ModC, at 12,944 to 13,732
GFF5637
GFF5638 - no description, at 13,767 to 14,048
GFF5638
Position (kb)
12
13 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 11.381 kb on + strand at 11.381 kb on + strand at 11.381 kb on + strand at 11.381 kb on + strand at 11.381 kb on + strand at 11.381 kb on + strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.382 kb on - strand at 11.383 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.393 kb on + strand at 11.394 kb on - strand at 11.394 kb on - strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.395 kb on + strand at 11.396 kb on - strand at 11.396 kb on - strand at 11.396 kb on - strand at 11.396 kb on - strand at 11.396 kb on - strand at 11.434 kb on + strand at 11.434 kb on + strand at 11.435 kb on - strand at 11.448 kb on + strand at 11.448 kb on + strand at 11.449 kb on - strand at 11.449 kb on - strand at 11.449 kb on - strand at 11.449 kb on - strand at 11.449 kb on - strand at 11.464 kb on - strand at 11.464 kb on - strand at 11.675 kb on - strand, within GFF5635 at 11.740 kb on + strand, within GFF5635 at 11.740 kb on + strand, within GFF5635 at 11.740 kb on + strand, within GFF5635 at 11.740 kb on + strand, within GFF5635 at 11.741 kb on - strand, within GFF5635 at 11.741 kb on - strand, within GFF5635 at 11.741 kb on - strand, within GFF5635 at 11.741 kb on - strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.040 kb on + strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.041 kb on - strand, within GFF5635 at 12.182 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.184 kb on + strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.185 kb on - strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.186 kb on + strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.187 kb on - strand at 12.627 kb on + strand, within GFF5636 at 12.628 kb on - strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.717 kb on + strand, within GFF5636 at 12.718 kb on - strand, within GFF5636 at 12.718 kb on - strand, within GFF5636 at 12.828 kb on + strand, within GFF5636 at 12.828 kb on + strand, within GFF5636 at 12.829 kb on - strand, within GFF5636 at 12.829 kb on - strand, within GFF5636 at 13.040 kb on + strand, within GFF5637 at 13.040 kb on + strand, within GFF5637 at 13.040 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.139 kb on + strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.140 kb on - strand, within GFF5637 at 13.191 kb on - strand, within GFF5637 at 13.191 kb on - strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.205 kb on + strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.206 kb on - strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.225 kb on + strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.226 kb on - strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.580 kb on + strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.581 kb on - strand, within GFF5637 at 13.741 kb on + strand at 13.749 kb on - strand at 13.756 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 11,381 + +1.1 11,381 + -0.7 11,381 + -0.2 11,381 + -0.7 11,381 + -0.0 11,381 + -0.8 11,382 - -0.5 11,382 - -0.4 11,382 - +0.0 11,382 - -0.7 11,382 - +0.3 11,382 - -0.5 11,382 - -0.2 11,382 - +0.0 11,383 + +0.4 11,393 + -0.4 11,393 + +0.6 11,393 + +0.0 11,393 + -3.1 11,393 + -1.0 11,393 + -0.7 11,393 + +0.6 11,393 + -0.6 11,393 + -0.1 11,393 + -0.7 11,394 - -0.5 11,394 - -1.1 11,395 + -0.1 11,395 + +0.0 11,395 + -0.7 11,395 + +0.6 11,395 + +1.2 11,395 + -0.7 11,395 + +0.4 11,395 + -0.9 11,396 - +0.7 11,396 - +0.2 11,396 - -0.1 11,396 - -0.5 11,396 - -0.6 11,434 + +0.2 11,434 + +0.4 11,435 - -0.1 11,448 + -0.4 11,448 + -0.0 11,449 - +0.6 11,449 - +0.4 11,449 - +1.2 11,449 - +0.1 11,449 - -0.5 11,464 - +1.6 11,464 - +2.6 11,675 - GFF5635 0.30 -1.0 11,740 + GFF5635 0.39 -0.2 11,740 + GFF5635 0.39 +0.8 11,740 + GFF5635 0.39 +0.7 11,740 + GFF5635 0.39 -1.7 11,741 - GFF5635 0.40 -0.3 11,741 - GFF5635 0.40 +0.0 11,741 - GFF5635 0.40 -0.7 11,741 - GFF5635 0.40 +0.6 12,040 + GFF5635 0.83 -0.5 12,040 + GFF5635 0.83 -0.2 12,040 + GFF5635 0.83 +0.0 12,040 + GFF5635 0.83 -3.2 12,040 + GFF5635 0.83 -1.1 12,040 + GFF5635 0.83 -1.4 12,040 + GFF5635 0.83 -0.7 12,040 + GFF5635 0.83 -0.2 12,040 + GFF5635 0.83 -0.4 12,041 - GFF5635 0.83 -1.0 12,041 - GFF5635 0.83 -0.0 12,041 - GFF5635 0.83 -0.0 12,041 - GFF5635 0.83 -0.4 12,041 - GFF5635 0.83 -0.2 12,041 - GFF5635 0.83 +1.1 12,041 - GFF5635 0.83 -2.2 12,041 - GFF5635 0.83 +0.1 12,041 - GFF5635 0.83 -0.6 12,182 + -0.7 12,184 + +1.9 12,184 + -0.8 12,184 + +0.2 12,184 + -0.3 12,184 + -1.3 12,185 - +0.0 12,185 - -0.4 12,185 - -0.5 12,185 - +0.4 12,185 - +0.4 12,186 + -0.6 12,186 + -0.6 12,186 + +0.6 12,186 + -0.1 12,186 + -0.1 12,187 - -0.1 12,187 - +0.5 12,187 - -0.4 12,187 - +0.0 12,187 - -1.4 12,627 + GFF5636 0.57 -0.7 12,628 - GFF5636 0.57 -0.4 12,717 + GFF5636 0.69 +0.6 12,717 + GFF5636 0.69 -0.2 12,717 + GFF5636 0.69 -0.8 12,717 + GFF5636 0.69 -0.8 12,718 - GFF5636 0.69 +0.4 12,718 - GFF5636 0.69 -2.1 12,828 + GFF5636 0.84 -0.2 12,828 + GFF5636 0.84 -2.4 12,829 - GFF5636 0.84 -0.8 12,829 - GFF5636 0.84 +0.2 13,040 + GFF5637 0.12 +0.2 13,040 + GFF5637 0.12 -0.4 13,040 + GFF5637 0.12 +0.4 13,139 + GFF5637 0.25 -0.1 13,139 + GFF5637 0.25 -1.2 13,139 + GFF5637 0.25 -1.0 13,140 - GFF5637 0.25 +0.5 13,140 - GFF5637 0.25 -0.1 13,140 - GFF5637 0.25 -1.2 13,140 - GFF5637 0.25 -0.5 13,191 - GFF5637 0.31 -0.0 13,191 - GFF5637 0.31 -1.8 13,205 + GFF5637 0.33 -0.5 13,205 + GFF5637 0.33 -0.2 13,205 + GFF5637 0.33 -0.2 13,205 + GFF5637 0.33 -1.6 13,205 + GFF5637 0.33 +0.2 13,205 + GFF5637 0.33 -0.1 13,206 - GFF5637 0.33 -0.1 13,206 - GFF5637 0.33 -0.4 13,206 - GFF5637 0.33 +0.0 13,206 - GFF5637 0.33 -0.4 13,225 + GFF5637 0.36 -1.2 13,225 + GFF5637 0.36 -0.8 13,225 + GFF5637 0.36 -0.2 13,225 + GFF5637 0.36 -0.2 13,226 - GFF5637 0.36 -0.4 13,226 - GFF5637 0.36 -0.6 13,226 - GFF5637 0.36 -0.1 13,580 + GFF5637 0.81 -1.4 13,580 + GFF5637 0.81 -0.7 13,580 + GFF5637 0.81 -0.5 13,581 - GFF5637 0.81 -0.9 13,581 - GFF5637 0.81 +0.6 13,581 - GFF5637 0.81 +1.6 13,581 - GFF5637 0.81 -0.2 13,581 - GFF5637 0.81 +0.2 13,741 + +0.5 13,749 - -1.5 13,756 - -1.1
Or see this region's nucleotide sequence