Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5073 and GFF5074 are separated by 162 nucleotides GFF5074 and GFF5075 are separated by 10 nucleotides
GFF5072 - 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like, at 174,628 to 175,854
GFF5072
GFF5073 - 3-oxoacyl-[ACP] synthase, at 175,851 to 176,690
GFF5073
GFF5074 - Two-component transcriptional response regulator Dtpsy_0213, OmpR family, at 176,853 to 177,575
GFF5074
GFF5075 - Two-component system sensor histidine kinase Dtpsy_0212, at 177,586 to 178,782
GFF5075
Position (kb) 176
177
178 Strain fitness (log2 ratio) -2
-1
0
1
2 at 175.890 kb on + strand at 175.890 kb on + strand at 175.890 kb on + strand at 175.890 kb on + strand at 175.890 kb on + strand at 175.890 kb on + strand at 175.891 kb on - strand at 175.891 kb on - strand at 175.891 kb on - strand at 175.891 kb on - strand at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.157 kb on + strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.158 kb on - strand, within GFF5073 at 176.241 kb on + strand, within GFF5073 at 176.241 kb on + strand, within GFF5073 at 176.241 kb on + strand, within GFF5073 at 176.373 kb on + strand, within GFF5073 at 176.373 kb on + strand, within GFF5073 at 176.374 kb on - strand, within GFF5073 at 176.761 kb on - strand at 176.804 kb on + strand at 176.805 kb on - strand at 176.815 kb on - strand at 176.925 kb on + strand at 176.925 kb on + strand at 176.925 kb on + strand at 176.925 kb on + strand at 176.925 kb on + strand at 176.926 kb on - strand, within GFF5074 at 176.926 kb on - strand, within GFF5074 at 177.097 kb on + strand, within GFF5074 at 177.097 kb on + strand, within GFF5074 at 177.097 kb on + strand, within GFF5074 at 177.097 kb on + strand, within GFF5074 at 177.097 kb on + strand, within GFF5074 at 177.098 kb on - strand, within GFF5074 at 177.172 kb on - strand, within GFF5074 at 177.172 kb on - strand, within GFF5074 at 177.351 kb on + strand, within GFF5074 at 177.351 kb on + strand, within GFF5074 at 177.351 kb on + strand, within GFF5074 at 177.352 kb on - strand, within GFF5074 at 177.352 kb on - strand, within GFF5074 at 177.352 kb on - strand, within GFF5074 at 177.549 kb on + strand at 177.549 kb on + strand at 177.549 kb on + strand at 177.549 kb on + strand at 177.550 kb on - strand at 177.550 kb on - strand at 177.550 kb on - strand at 177.550 kb on - strand at 177.602 kb on - strand at 177.602 kb on - strand at 177.602 kb on - strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.616 kb on + strand at 177.617 kb on - strand at 177.617 kb on - strand at 177.617 kb on - strand at 177.617 kb on - strand at 177.617 kb on - strand at 177.617 kb on - strand at 177.964 kb on + strand, within GFF5075
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 175,890 + +1.2 175,890 + +0.2 175,890 + -0.3 175,890 + -0.2 175,890 + -0.5 175,890 + -0.2 175,891 - +1.7 175,891 - -0.1 175,891 - -1.5 175,891 - -1.0 176,157 + GFF5073 0.36 +0.3 176,157 + GFF5073 0.36 -0.3 176,157 + GFF5073 0.36 -1.0 176,157 + GFF5073 0.36 +0.6 176,157 + GFF5073 0.36 -0.5 176,157 + GFF5073 0.36 -0.4 176,157 + GFF5073 0.36 -0.6 176,157 + GFF5073 0.36 -1.3 176,157 + GFF5073 0.36 +0.2 176,158 - GFF5073 0.37 +0.5 176,158 - GFF5073 0.37 +0.2 176,158 - GFF5073 0.37 +0.1 176,158 - GFF5073 0.37 -0.2 176,158 - GFF5073 0.37 +1.2 176,158 - GFF5073 0.37 -0.4 176,158 - GFF5073 0.37 +0.2 176,158 - GFF5073 0.37 -1.1 176,158 - GFF5073 0.37 +0.4 176,158 - GFF5073 0.37 -0.5 176,158 - GFF5073 0.37 -0.3 176,158 - GFF5073 0.37 -1.3 176,158 - GFF5073 0.37 -0.3 176,241 + GFF5073 0.46 -0.1 176,241 + GFF5073 0.46 -2.1 176,241 + GFF5073 0.46 -0.0 176,373 + GFF5073 0.62 +0.5 176,373 + GFF5073 0.62 -0.4 176,374 - GFF5073 0.62 +1.9 176,761 - -0.8 176,804 + -0.6 176,805 - +0.4 176,815 - -0.6 176,925 + +0.7 176,925 + -0.6 176,925 + -0.7 176,925 + +0.1 176,925 + +0.2 176,926 - GFF5074 0.10 -0.7 176,926 - GFF5074 0.10 -0.6 177,097 + GFF5074 0.34 +0.3 177,097 + GFF5074 0.34 +0.1 177,097 + GFF5074 0.34 -1.0 177,097 + GFF5074 0.34 +0.0 177,097 + GFF5074 0.34 -0.4 177,098 - GFF5074 0.34 -0.2 177,172 - GFF5074 0.44 -0.0 177,172 - GFF5074 0.44 -0.7 177,351 + GFF5074 0.69 +1.7 177,351 + GFF5074 0.69 -0.4 177,351 + GFF5074 0.69 +0.2 177,352 - GFF5074 0.69 -0.1 177,352 - GFF5074 0.69 -0.7 177,352 - GFF5074 0.69 +0.2 177,549 + -0.3 177,549 + -1.1 177,549 + +2.2 177,549 + -0.6 177,550 - -0.3 177,550 - -0.3 177,550 - -0.7 177,550 - +1.5 177,602 - +0.2 177,602 - -0.3 177,602 - -0.2 177,616 + -1.6 177,616 + -2.1 177,616 + +1.0 177,616 + -0.4 177,616 + -0.3 177,616 + +0.6 177,616 + -0.7 177,617 - +0.1 177,617 - -1.0 177,617 - -0.9 177,617 - -0.4 177,617 - -0.4 177,617 - -1.4 177,964 + GFF5075 0.32 -1.1
Or see this region's nucleotide sequence