Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4907 and GFF4908 are separated by 30 nucleotides
GFF4907 - NAD(P) transhydrogenase C-domain of subunit alpha (EC 1.6.1.2), at 49 to 387
GFF4907
GFF4908 - NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2), at 418 to 1,548
GFF4908
Position (kb) 0
1 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 0.024 kb on + strand at 0.024 kb on + strand at 0.024 kb on + strand at 0.024 kb on + strand at 0.024 kb on + strand at 0.024 kb on + strand at 0.024 kb on + strand at 0.025 kb on - strand at 0.025 kb on - strand at 0.025 kb on - strand at 0.025 kb on - strand at 0.025 kb on - strand at 0.025 kb on - strand at 0.081 kb on + strand at 0.081 kb on + strand at 0.081 kb on + strand at 0.081 kb on + strand at 0.081 kb on + strand at 0.082 kb on - strand at 0.082 kb on - strand at 0.323 kb on + strand, within GFF4907 at 0.323 kb on + strand, within GFF4907 at 0.324 kb on - strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.332 kb on + strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.333 kb on - strand, within GFF4907 at 0.370 kb on - strand at 0.376 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.419 kb on + strand at 0.420 kb on - strand at 0.420 kb on - strand at 0.420 kb on - strand at 0.420 kb on - strand at 0.420 kb on - strand at 0.420 kb on - strand at 0.545 kb on + strand, within GFF4908 at 0.545 kb on + strand, within GFF4908 at 0.545 kb on + strand, within GFF4908 at 0.545 kb on + strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.546 kb on - strand, within GFF4908 at 0.905 kb on + strand, within GFF4908 at 0.905 kb on + strand, within GFF4908 at 0.905 kb on + strand, within GFF4908 at 0.905 kb on + strand, within GFF4908 at 0.905 kb on + strand, within GFF4908 at 0.906 kb on - strand, within GFF4908 at 0.906 kb on - strand, within GFF4908 at 0.906 kb on - strand, within GFF4908 at 0.906 kb on - strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.106 kb on + strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.107 kb on - strand, within GFF4908 at 1.136 kb on + strand, within GFF4908 at 1.136 kb on + strand, within GFF4908 at 1.136 kb on + strand, within GFF4908 at 1.136 kb on + strand, within GFF4908 at 1.136 kb on + strand, within GFF4908 at 1.137 kb on - strand, within GFF4908 at 1.137 kb on - strand, within GFF4908 at 1.137 kb on - strand, within GFF4908
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 24 + -0.4 24 + +0.8 24 + +0.4 24 + +0.2 24 + -0.6 24 + -0.3 24 + +0.5 25 - +0.2 25 - -0.4 25 - -0.2 25 - -0.8 25 - +0.2 25 - -0.4 81 + -0.5 81 + -0.6 81 + +0.2 81 + -0.8 81 + +0.2 82 - -1.7 82 - -0.4 323 + GFF4907 0.81 +0.0 323 + GFF4907 0.81 -0.6 324 - GFF4907 0.81 -0.8 332 + GFF4907 0.83 +0.2 332 + GFF4907 0.83 +0.0 332 + GFF4907 0.83 -0.4 332 + GFF4907 0.83 +1.4 332 + GFF4907 0.83 +0.9 332 + GFF4907 0.83 -0.3 332 + GFF4907 0.83 +0.2 332 + GFF4907 0.83 -1.2 332 + GFF4907 0.83 -0.4 332 + GFF4907 0.83 +0.5 332 + GFF4907 0.83 +0.3 332 + GFF4907 0.83 -0.6 333 - GFF4907 0.84 -1.3 333 - GFF4907 0.84 -0.1 333 - GFF4907 0.84 -1.1 333 - GFF4907 0.84 -0.1 333 - GFF4907 0.84 +0.2 333 - GFF4907 0.84 -0.8 333 - GFF4907 0.84 +0.6 333 - GFF4907 0.84 +0.7 333 - GFF4907 0.84 +0.0 333 - GFF4907 0.84 +0.3 333 - GFF4907 0.84 +0.9 333 - GFF4907 0.84 -0.9 333 - GFF4907 0.84 -1.4 333 - GFF4907 0.84 -0.1 333 - GFF4907 0.84 -0.4 333 - GFF4907 0.84 -0.2 333 - GFF4907 0.84 -0.4 333 - GFF4907 0.84 +2.0 333 - GFF4907 0.84 -0.3 333 - GFF4907 0.84 +1.4 333 - GFF4907 0.84 -0.3 333 - GFF4907 0.84 +2.2 333 - GFF4907 0.84 -0.1 370 - -1.4 376 + +0.7 419 + -2.0 419 + +1.7 419 + -0.4 419 + -0.5 419 + -0.4 419 + +1.3 419 + +0.4 419 + -0.1 419 + -1.8 419 + -2.7 419 + -1.1 419 + -0.5 419 + -0.3 419 + -0.6 420 - -0.3 420 - -0.6 420 - -0.8 420 - -0.2 420 - +0.5 420 - -1.0 545 + GFF4908 0.11 -0.1 545 + GFF4908 0.11 +1.1 545 + GFF4908 0.11 -0.8 545 + GFF4908 0.11 -0.3 546 - GFF4908 0.11 -0.9 546 - GFF4908 0.11 -0.0 546 - GFF4908 0.11 -2.2 546 - GFF4908 0.11 +0.1 546 - GFF4908 0.11 -0.3 546 - GFF4908 0.11 -0.1 905 + GFF4908 0.43 -0.9 905 + GFF4908 0.43 -3.5 905 + GFF4908 0.43 -1.6 905 + GFF4908 0.43 +0.0 905 + GFF4908 0.43 -0.3 906 - GFF4908 0.43 +0.7 906 - GFF4908 0.43 +0.4 906 - GFF4908 0.43 -0.4 906 - GFF4908 0.43 -0.7 1,106 + GFF4908 0.61 -0.1 1,106 + GFF4908 0.61 +1.4 1,106 + GFF4908 0.61 +0.0 1,106 + GFF4908 0.61 +0.2 1,106 + GFF4908 0.61 +0.4 1,106 + GFF4908 0.61 +0.2 1,106 + GFF4908 0.61 +0.8 1,107 - GFF4908 0.61 +0.7 1,107 - GFF4908 0.61 -1.0 1,107 - GFF4908 0.61 +0.0 1,107 - GFF4908 0.61 -0.5 1,107 - GFF4908 0.61 +0.0 1,107 - GFF4908 0.61 -0.2 1,107 - GFF4908 0.61 -0.5 1,107 - GFF4908 0.61 -1.1 1,107 - GFF4908 0.61 +0.1 1,107 - GFF4908 0.61 +0.6 1,107 - GFF4908 0.61 +0.5 1,107 - GFF4908 0.61 +0.5 1,107 - GFF4908 0.61 -1.5 1,107 - GFF4908 0.61 -0.4 1,107 - GFF4908 0.61 -2.3 1,107 - GFF4908 0.61 -0.3 1,107 - GFF4908 0.61 -0.8 1,107 - GFF4908 0.61 -0.2 1,107 - GFF4908 0.61 -0.4 1,107 - GFF4908 0.61 +0.4 1,136 + GFF4908 0.63 +0.0 1,136 + GFF4908 0.63 -0.3 1,136 + GFF4908 0.63 -1.1 1,136 + GFF4908 0.63 -0.3 1,136 + GFF4908 0.63 -0.4 1,137 - GFF4908 0.64 +0.5 1,137 - GFF4908 0.64 +0.4 1,137 - GFF4908 0.64 -0.8
Or see this region's nucleotide sequence