Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2131 and GFF2132 overlap by 1 nucleotides GFF2132 and GFF2133 are separated by 40 nucleotides
GFF2131 - Putative protease, at 179,503 to 181,353
GFF2131
GFF2132 - Thiol:disulfide interchange protein DsbC, at 181,353 to 182,075
GFF2132
GFF2133 - 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 182,116 to 183,243
GFF2133
Position (kb) 181
182
183 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 180.353 kb on + strand, within GFF2131 at 180.353 kb on + strand, within GFF2131 at 180.353 kb on + strand, within GFF2131 at 180.368 kb on + strand, within GFF2131 at 180.368 kb on + strand, within GFF2131 at 180.369 kb on - strand, within GFF2131 at 180.369 kb on - strand, within GFF2131 at 180.369 kb on - strand, within GFF2131 at 180.369 kb on - strand, within GFF2131 at 180.369 kb on - strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.425 kb on + strand, within GFF2131 at 180.426 kb on - strand, within GFF2131 at 180.426 kb on - strand, within GFF2131 at 180.458 kb on + strand, within GFF2131 at 180.458 kb on + strand, within GFF2131 at 180.458 kb on + strand, within GFF2131 at 180.458 kb on + strand, within GFF2131 at 180.459 kb on - strand, within GFF2131 at 180.459 kb on - strand, within GFF2131 at 180.459 kb on - strand, within GFF2131 at 180.459 kb on - strand, within GFF2131 at 180.459 kb on - strand, within GFF2131 at 180.551 kb on + strand, within GFF2131 at 180.585 kb on - strand, within GFF2131 at 180.585 kb on - strand, within GFF2131 at 180.585 kb on - strand, within GFF2131 at 180.585 kb on - strand, within GFF2131 at 180.821 kb on + strand, within GFF2131 at 180.822 kb on - strand, within GFF2131 at 180.822 kb on - strand, within GFF2131 at 180.822 kb on - strand, within GFF2131 at 181.040 kb on + strand, within GFF2131 at 181.040 kb on + strand, within GFF2131 at 181.040 kb on + strand, within GFF2131 at 181.040 kb on + strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.041 kb on - strand, within GFF2131 at 181.175 kb on + strand at 181.175 kb on + strand at 181.176 kb on - strand at 181.176 kb on - strand at 181.459 kb on + strand, within GFF2132 at 181.459 kb on + strand, within GFF2132 at 181.459 kb on + strand, within GFF2132 at 181.459 kb on + strand, within GFF2132 at 181.459 kb on + strand, within GFF2132 at 181.459 kb on + strand, within GFF2132 at 181.460 kb on - strand, within GFF2132 at 181.460 kb on - strand, within GFF2132 at 181.460 kb on - strand, within GFF2132 at 181.460 kb on - strand, within GFF2132 at 181.628 kb on - strand, within GFF2132 at 181.639 kb on + strand, within GFF2132 at 181.639 kb on + strand, within GFF2132 at 181.639 kb on + strand, within GFF2132 at 181.639 kb on + strand, within GFF2132 at 181.640 kb on - strand, within GFF2132 at 181.640 kb on - strand, within GFF2132 at 181.640 kb on - strand, within GFF2132 at 181.640 kb on - strand, within GFF2132 at 181.640 kb on - strand, within GFF2132 at 181.690 kb on + strand, within GFF2132 at 181.690 kb on + strand, within GFF2132 at 181.691 kb on - strand, within GFF2132 at 181.864 kb on + strand, within GFF2132 at 181.864 kb on + strand, within GFF2132 at 181.864 kb on + strand, within GFF2132 at 181.864 kb on + strand, within GFF2132 at 181.864 kb on + strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.865 kb on - strand, within GFF2132 at 181.885 kb on + strand, within GFF2132 at 181.885 kb on + strand, within GFF2132 at 181.885 kb on + strand, within GFF2132 at 181.886 kb on - strand, within GFF2132 at 181.886 kb on - strand, within GFF2132 at 181.886 kb on - strand, within GFF2132 at 181.886 kb on - strand, within GFF2132 at 181.919 kb on - strand, within GFF2132 at 182.052 kb on + strand at 182.053 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 180,353 + GFF2131 0.46 -1.8 180,353 + GFF2131 0.46 +0.7 180,353 + GFF2131 0.46 -0.8 180,368 + GFF2131 0.47 -0.2 180,368 + GFF2131 0.47 -0.1 180,369 - GFF2131 0.47 +0.5 180,369 - GFF2131 0.47 -0.2 180,369 - GFF2131 0.47 -0.2 180,369 - GFF2131 0.47 -0.4 180,369 - GFF2131 0.47 -0.0 180,425 + GFF2131 0.50 -0.3 180,425 + GFF2131 0.50 -0.1 180,425 + GFF2131 0.50 +1.1 180,425 + GFF2131 0.50 -0.1 180,425 + GFF2131 0.50 +1.3 180,425 + GFF2131 0.50 -1.1 180,425 + GFF2131 0.50 -0.3 180,426 - GFF2131 0.50 -0.6 180,426 - GFF2131 0.50 -0.6 180,458 + GFF2131 0.52 -0.7 180,458 + GFF2131 0.52 -1.9 180,458 + GFF2131 0.52 +0.1 180,458 + GFF2131 0.52 -1.9 180,459 - GFF2131 0.52 +0.2 180,459 - GFF2131 0.52 +1.2 180,459 - GFF2131 0.52 +0.4 180,459 - GFF2131 0.52 -0.2 180,459 - GFF2131 0.52 -0.3 180,551 + GFF2131 0.57 -0.7 180,585 - GFF2131 0.58 -0.2 180,585 - GFF2131 0.58 +0.3 180,585 - GFF2131 0.58 -0.7 180,585 - GFF2131 0.58 -0.4 180,821 + GFF2131 0.71 -0.2 180,822 - GFF2131 0.71 -0.5 180,822 - GFF2131 0.71 -0.3 180,822 - GFF2131 0.71 -0.7 181,040 + GFF2131 0.83 -0.0 181,040 + GFF2131 0.83 -0.1 181,040 + GFF2131 0.83 +0.2 181,040 + GFF2131 0.83 -0.6 181,041 - GFF2131 0.83 -1.2 181,041 - GFF2131 0.83 +0.1 181,041 - GFF2131 0.83 -0.2 181,041 - GFF2131 0.83 -0.2 181,041 - GFF2131 0.83 -1.3 181,041 - GFF2131 0.83 +0.2 181,175 + -0.1 181,175 + -0.6 181,176 - -0.1 181,176 - -0.1 181,459 + GFF2132 0.15 -0.0 181,459 + GFF2132 0.15 +0.5 181,459 + GFF2132 0.15 -1.0 181,459 + GFF2132 0.15 -1.2 181,459 + GFF2132 0.15 +0.3 181,459 + GFF2132 0.15 -0.1 181,460 - GFF2132 0.15 +0.1 181,460 - GFF2132 0.15 +0.3 181,460 - GFF2132 0.15 -0.9 181,460 - GFF2132 0.15 -0.2 181,628 - GFF2132 0.38 +0.7 181,639 + GFF2132 0.40 -0.2 181,639 + GFF2132 0.40 +3.3 181,639 + GFF2132 0.40 -0.1 181,639 + GFF2132 0.40 -0.2 181,640 - GFF2132 0.40 +0.2 181,640 - GFF2132 0.40 -0.4 181,640 - GFF2132 0.40 -0.5 181,640 - GFF2132 0.40 -0.7 181,640 - GFF2132 0.40 -0.0 181,690 + GFF2132 0.47 -0.8 181,690 + GFF2132 0.47 -1.4 181,691 - GFF2132 0.47 +0.3 181,864 + GFF2132 0.71 +0.2 181,864 + GFF2132 0.71 -0.1 181,864 + GFF2132 0.71 -0.6 181,864 + GFF2132 0.71 -0.7 181,864 + GFF2132 0.71 -0.2 181,865 - GFF2132 0.71 +0.1 181,865 - GFF2132 0.71 -0.4 181,865 - GFF2132 0.71 -0.2 181,865 - GFF2132 0.71 -0.5 181,865 - GFF2132 0.71 -1.2 181,865 - GFF2132 0.71 +0.7 181,865 - GFF2132 0.71 -3.2 181,865 - GFF2132 0.71 +0.2 181,865 - GFF2132 0.71 -0.9 181,885 + GFF2132 0.74 -0.9 181,885 + GFF2132 0.74 -1.1 181,885 + GFF2132 0.74 -0.5 181,886 - GFF2132 0.74 +0.4 181,886 - GFF2132 0.74 -0.4 181,886 - GFF2132 0.74 -0.6 181,886 - GFF2132 0.74 -0.6 181,919 - GFF2132 0.78 +0.4 182,052 + +0.8 182,053 - +0.3
Or see this region's nucleotide sequence