Strain Fitness in Variovorax sp. SCN45 around GFF1530

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
126,506	-		GFF1528	0.72	-0.4
126,506	-		GFF1528	0.72	-1.4
126,506	-		GFF1528	0.72	-0.2
126,514	+		GFF1528	0.72	+0.4
126,515	-		GFF1528	0.73	-0.2
126,580	+		GFF1528	0.78	-0.2
126,580	+		GFF1528	0.78	+1.3
126,581	-		GFF1528	0.78	-2.1
126,581	-		GFF1528	0.78	+0.1
126,764	+				-1.3
126,854	-				+0.8
127,283	-		GFF1529	0.76	-0.8
127,456	+				-0.3
127,457	-				+0.4
127,463	-				-0.7
127,463	-				-0.2
127,578	+				+0.3
127,579	-				+0.5
128,048	+		GFF1530	0.61	-0.7
128,049	-		GFF1530	0.62	-0.6
128,423	+				-0.1
128,423	+				-1.4
128,423	+				-0.4
128,423	+				-0.0
128,424	-				+0.4
128,424	-				-0.7
128,424	-				-0.4
128,424	-				-0.3
128,694	-		GFF1531	0.19	-0.4
128,888	+		GFF1531	0.32	+0.9
128,888	+		GFF1531	0.32	+0.1
129,074	+		GFF1531	0.45	-0.8
129,074	+		GFF1531	0.45	-0.7
129,161	-		GFF1531	0.51	+0.0
129,209	+		GFF1531	0.54	-1.0
129,209	+		GFF1531	0.54	-0.1
129,377	+		GFF1531	0.66	-0.8
129,377	+		GFF1531	0.66	-0.4
129,377	+		GFF1531	0.66	-1.4
129,378	-		GFF1531	0.66	+0.2
129,378	-		GFF1531	0.66	+0.1
129,378	-		GFF1531	0.66	+0.1
129,378	-		GFF1531	0.66	+1.1