Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01928 and MPMX19_01929 are separated by 253 nucleotides MPMX19_01929 and MPMX19_01930 are separated by 208 nucleotides MPMX19_01930 and MPMX19_01931 are separated by 56 nucleotides MPMX19_01931 and MPMX19_01932 are separated by 162 nucleotides
MPMX19_01928: MPMX19_01928 - hypothetical protein, at 2,011,374 to 2,012,036
_01928
MPMX19_01929: MPMX19_01929 - tRNA-Ser, at 2,012,290 to 2,012,379
_01929
MPMX19_01930: MPMX19_01930 - 50S ribosomal protein L21, at 2,012,588 to 2,012,905
_01930
MPMX19_01931: MPMX19_01931 - 50S ribosomal protein L27, at 2,012,962 to 2,013,249
_01931
MPMX19_01932: MPMX19_01932 - GTPase Obg, at 2,013,412 to 2,014,719
_01932
Position (kb)
2012
2013
2014 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.993 kb on + strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2011.994 kb on - strand at 2012.271 kb on - strand at 2012.271 kb on - strand at 2012.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum remove 2,011,993 + +0.4 2,011,993 + -1.0 2,011,993 + +0.1 2,011,993 + +0.4 2,011,993 + +0.5 2,011,993 + +0.3 2,011,993 + +0.3 2,011,993 + +1.3 2,011,993 + +0.2 2,011,993 + +1.7 2,011,993 + -0.3 2,011,993 + -0.6 2,011,993 + +1.3 2,011,993 + +1.0 2,011,993 + -0.4 2,011,993 + -2.8 2,011,993 + -0.3 2,011,993 + +0.2 2,011,993 + +1.2 2,011,993 + +0.1 2,011,993 + +1.1 2,011,993 + +0.1 2,011,993 + +0.2 2,011,994 - -1.0 2,011,994 - -0.5 2,011,994 - +0.5 2,011,994 - -0.9 2,011,994 - -0.8 2,011,994 - -0.2 2,011,994 - -1.5 2,011,994 - -0.6 2,011,994 - +0.3 2,011,994 - +0.3 2,011,994 - -0.2 2,011,994 - -0.4 2,011,994 - -0.6 2,011,994 - -0.8 2,011,994 - +0.5 2,011,994 - -1.4 2,011,994 - +0.1 2,011,994 - -0.0 2,011,994 - -1.0 2,011,994 - +1.3 2,011,994 - -1.6 2,011,994 - +0.1 2,011,994 - -0.8 2,011,994 - +0.2 2,012,271 - -0.5 2,012,271 - -0.7 2,012,271 - -0.5
Or see this region's nucleotide sequence