Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01917

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
2,001,488	+		MPMX19_01916	0.52	+0.2
2,001,488	+		MPMX19_01916	0.52	-1.6
2,001,488	+		MPMX19_01916	0.52	-0.4
2,001,488	+		MPMX19_01916	0.52	+0.2
2,001,488	+		MPMX19_01916	0.52	-1.5
2,001,489	-		MPMX19_01916	0.52	-0.0
2,001,489	-		MPMX19_01916	0.52	-0.1
2,001,489	-		MPMX19_01916	0.52	+0.8
2,001,489	-		MPMX19_01916	0.52	+2.4
2,001,489	-		MPMX19_01916	0.52	-1.2
2,001,692	+		MPMX19_01916	0.69	-0.5
2,001,692	+		MPMX19_01916	0.69	+1.0
2,001,692	+		MPMX19_01916	0.69	-1.1
2,001,692	+		MPMX19_01916	0.69	-0.5
2,001,692	+		MPMX19_01916	0.69	+0.5
2,001,692	+		MPMX19_01916	0.69	+0.9
2,001,692	+		MPMX19_01916	0.69	+1.2
2,001,692	+		MPMX19_01916	0.69	-0.4
2,001,692	+		MPMX19_01916	0.69	-0.9
2,001,692	+		MPMX19_01916	0.69	+1.2
2,001,693	-		MPMX19_01916	0.69	-0.8
2,001,693	-		MPMX19_01916	0.69	-0.0
2,001,693	-		MPMX19_01916	0.69	+0.4
2,001,693	-		MPMX19_01916	0.69	+1.2
2,001,693	-		MPMX19_01916	0.69	-2.0
2,001,693	-		MPMX19_01916	0.69	-0.5
2,001,693	-		MPMX19_01916	0.69	-1.6
2,001,693	-		MPMX19_01916	0.69	+0.0
2,001,731	+		MPMX19_01916	0.73	-0.0
2,001,731	+		MPMX19_01916	0.73	-1.5
2,001,731	+		MPMX19_01916	0.73	-1.5
2,001,732	-		MPMX19_01916	0.73	+0.1
2,001,732	-		MPMX19_01916	0.73	-1.5
2,001,794	+		MPMX19_01916	0.78	-0.9
2,001,956	+				-0.3
2,001,956	+				+0.2
2,001,956	+				-1.4
2,001,956	+				-0.0
2,001,956	+				-0.2
2,001,956	+				+0.4
2,001,957	-				+0.2
2,001,957	-				+1.3
2,001,957	-				-0.8
2,001,957	-				+0.1
2,002,007	+				-0.5
2,002,007	+				-1.8
2,002,007	+				-0.2
2,002,008	-				+1.1
2,002,008	-				-1.1
2,002,008	-				-0.6
2,002,008	-				-0.5
2,002,008	-				+0.4
2,002,008	-				-2.4
2,002,008	-				+0.3
2,002,008	-				-1.3
2,002,013	+				+0.7
2,002,013	+				-0.7
2,002,013	+				-0.3
2,002,013	+				+0.3
2,002,014	-				-0.8
2,002,014	-				-0.1
2,002,014	-				-1.0
2,002,014	-				-0.5
2,002,014	-				-2.2
2,002,014	-				+0.6
2,002,014	-				-1.5
2,002,014	-				-0.3
2,002,014	-				+0.4
2,002,014	-				-1.3
2,002,014	-				-1.6
2,002,273	+				+1.2
2,002,273	+				+0.3
2,002,273	+				-1.6
2,002,273	+				+0.1
2,002,273	+				+0.2
2,002,273	+				-1.8
2,002,273	+				-0.4
2,002,273	+				-0.5
2,002,273	+				-2.0
2,002,273	+				+0.9
2,002,273	+				-0.5
2,002,273	+				-0.1
2,002,273	+				-0.3
2,002,273	+				-0.4
2,002,273	+				-0.0
2,002,273	+				+0.3
2,002,273	+				-0.0
2,002,273	+				-1.6
2,002,273	+				+1.5
2,002,273	+				-0.0
2,002,273	+				+0.8
2,002,273	+				+0.4
2,002,273	+				+1.1
2,002,273	+				-0.4
2,002,273	+				+0.4
2,002,274	-				-1.2
2,002,274	-				-0.5
2,002,274	-				+0.2
2,002,274	-				-0.8
2,002,274	-				-1.5
2,002,274	-				+0.1
2,002,274	-				-1.0
2,002,274	-				-0.7
2,002,274	-				+0.3
2,002,274	-				+0.1
2,002,274	-				+1.5
2,002,274	-				-0.6
2,002,274	-				+0.2
2,002,274	-				-0.9
2,002,274	-				+0.5
2,002,274	-				+0.3
2,002,274	-				-0.5
2,002,274	-				+0.4
2,002,274	-				-1.6
2,002,274	-				-0.5
2,002,274	-				+0.2
2,002,274	-				-0.4
2,002,274	-				-0.0
2,002,274	-				-0.2
2,002,274	-				+0.7
2,002,274	-				-0.0
2,002,274	-				+0.8
2,002,274	-				-0.5
2,002,274	-				-1.2
2,002,274	-				+0.7
2,002,274	-				-0.9
2,002,274	-				+1.2
2,002,274	-				-0.7
2,002,277	+				+0.5
2,002,277	+				+1.5
2,002,277	+				-0.0
2,002,277	+				+0.7
2,002,277	+				-0.5
2,002,277	+				+0.7
2,002,277	+				+0.8
2,002,277	+				+0.1
2,002,278	-				+0.3
2,002,278	-				+0.2
2,002,278	-				+0.3
2,002,278	-				-0.8
2,002,278	-				-1.3
2,002,278	-				+0.5
2,002,278	-				+1.1
2,002,278	-				-1.2
2,002,278	-				-0.3
2,002,278	-				-0.1
2,002,278	-				-0.5
2,002,316	+				+0.2
2,002,316	+				-1.0
2,002,316	+				-0.9
2,002,317	-				+0.0
2,002,317	-				+0.4
2,002,375	+				-0.7
2,002,376	-				+0.1
2,002,376	-				+0.2
2,002,376	-				-1.0
2,002,376	-				-0.6
2,002,819	+		MPMX19_01917	0.87	-0.3
2,002,819	+		MPMX19_01917	0.87	-0.6
2,002,819	+		MPMX19_01917	0.87	-1.2
2,002,820	-		MPMX19_01917	0.87	-0.8
2,002,820	-		MPMX19_01917	0.87	+0.1
2,002,820	-		MPMX19_01917	0.87	-2.3
2,002,820	-		MPMX19_01917	0.87	-1.2
2,002,820	-		MPMX19_01917	0.87	-0.6
2,002,899	+				+0.5
2,002,944	+				+0.1
2,002,944	+				-1.0
2,002,945	-				+1.1
2,002,945	-				-0.7
2,003,006	+				-0.3
2,003,006	+				-1.1
2,003,006	+				-0.6
2,003,007	-				+0.9
2,003,007	-				-1.7
2,003,053	+				+0.1
2,003,054	-				+0.5
2,003,198	-		MPMX19_01918	0.63	-2.0
2,003,198	-		MPMX19_01918	0.63	+1.0
2,003,198	-		MPMX19_01918	0.63	-0.4
2,003,217	+		MPMX19_01918	0.88	-2.0
2,003,383	+				-0.2
2,003,383	+				-0.2
2,003,383	+				+0.4
2,003,383	+				+1.5
2,003,383	+				-1.8
2,003,383	+				-1.3
2,003,383	+				-0.7
2,003,383	+				-1.9
2,003,383	+				-0.5
2,003,383	+				-0.0
2,003,383	+				+1.7
2,003,383	+				-0.4
2,003,383	+				+0.9
2,003,383	+				-0.0
2,003,383	+				+0.5
2,003,383	+				-0.5
2,003,383	+				+0.3
2,003,384	-				-0.2
2,003,384	-				-0.9
2,003,384	-				+1.1
2,003,384	-				-0.0
2,003,384	-				-0.2
2,003,384	-				-1.3
2,003,384	-				+0.8
2,003,384	-				-0.3
2,003,384	-				-0.4
2,003,384	-				-0.7
2,003,384	-				+0.1
2,003,384	-				-0.3
2,003,384	-				-0.6
2,003,384	-				-1.1
2,003,384	-				-0.8
2,003,387	+				+0.7
2,003,387	+				-0.3
2,003,387	+				-0.6
2,003,388	-				+0.1
2,003,388	-				-2.8
2,003,388	-				-1.6
2,003,472	+				-0.3
2,003,473	-				-0.5
2,003,473	-				-1.1
2,003,487	-				-1.4
2,003,487	-				-0.2
2,003,487	-				+1.0
2,003,487	-				-1.2
2,003,507	+				+0.9
2,003,507	+				+1.0
2,003,507	+				+0.8
2,003,507	+				-1.8
2,003,507	+				+0.0
2,003,507	+				-0.2
2,003,508	-				-0.6
2,003,508	-				+0.4
2,003,508	-				-0.0
2,003,508	-				+0.3
2,003,516	+				-0.0
2,003,517	-				+0.3
2,003,819	+		MPMX19_01920	0.35	-0.2
2,003,819	+		MPMX19_01920	0.35	+1.1
2,003,819	+		MPMX19_01920	0.35	-1.4
2,003,819	+		MPMX19_01920	0.35	+0.5
2,003,819	+		MPMX19_01920	0.35	-0.6
2,003,819	+		MPMX19_01920	0.35	-1.3
2,003,819	+		MPMX19_01920	0.35	-0.5
2,003,819	+		MPMX19_01920	0.35	+0.8
2,003,819	+		MPMX19_01920	0.35	-1.2
2,003,819	+		MPMX19_01920	0.35	+0.0
2,003,819	+		MPMX19_01920	0.35	-0.7
2,003,819	+		MPMX19_01920	0.35	-0.9
2,003,819	+		MPMX19_01920	0.35	+0.4
2,003,819	+		MPMX19_01920	0.35	+1.1
2,003,819	+		MPMX19_01920	0.35	+0.9
2,003,820	-		MPMX19_01920	0.36	+0.2
2,003,820	-		MPMX19_01920	0.36	-2.4
2,003,820	-		MPMX19_01920	0.36	+0.2
2,003,820	-		MPMX19_01920	0.36	+1.5
2,003,820	-		MPMX19_01920	0.36	+0.7
2,003,820	-		MPMX19_01920	0.36	-1.9
2,003,820	-		MPMX19_01920	0.36	-0.6
2,003,820	-		MPMX19_01920	0.36	-0.5
2,003,820	-		MPMX19_01920	0.36	-1.3
2,003,820	-		MPMX19_01920	0.36	+0.3
2,003,820	-		MPMX19_01920	0.36	-0.5