Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01896

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,977,614	+				+1.0
1,977,614	+				-0.3
1,977,614	+				-1.0
1,977,614	+				+0.6
1,977,614	+				+0.4
1,977,614	+				-1.0
1,977,615	-				-0.0
1,977,615	-				+0.6
1,977,615	-				+0.8
1,977,615	-				-1.4
1,977,615	-				-0.0
1,977,615	-				-0.3
1,977,615	-				-0.6
1,977,730	+		MPMX19_01895	0.10	-0.4
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	+0.1
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	-0.4
1,977,730	+		MPMX19_01895	0.10	-0.8
1,977,730	+		MPMX19_01895	0.10	-0.7
1,977,730	+		MPMX19_01895	0.10	+0.6
1,977,730	+		MPMX19_01895	0.10	+0.0
1,977,730	+		MPMX19_01895	0.10	+0.2
1,977,730	+		MPMX19_01895	0.10	+0.1
1,977,730	+		MPMX19_01895	0.10	-1.2
1,977,731	-		MPMX19_01895	0.10	-1.6
1,977,731	-		MPMX19_01895	0.10	-0.6
1,977,731	-		MPMX19_01895	0.10	+1.2
1,977,731	-		MPMX19_01895	0.10	-0.9
1,977,731	-		MPMX19_01895	0.10	+0.3
1,977,731	-		MPMX19_01895	0.10	+0.4
1,977,731	-		MPMX19_01895	0.10	-1.0
1,977,731	-		MPMX19_01895	0.10	-0.8
1,977,731	-		MPMX19_01895	0.10	-0.2
1,977,731	-		MPMX19_01895	0.10	+0.1
1,977,731	-		MPMX19_01895	0.10	-0.9
1,977,731	-		MPMX19_01895	0.10	-0.6
1,977,731	-		MPMX19_01895	0.10	-0.1
1,977,731	-		MPMX19_01895	0.10	-1.1
1,977,731	-		MPMX19_01895	0.10	-0.4
1,977,885	+		MPMX19_01895	0.48	+0.7
1,977,885	+		MPMX19_01895	0.48	-0.2
1,977,885	+		MPMX19_01895	0.48	-0.6
1,977,885	+		MPMX19_01895	0.48	-1.2
1,977,885	+		MPMX19_01895	0.48	-0.4
1,977,886	-		MPMX19_01895	0.48	-0.0
1,977,886	-		MPMX19_01895	0.48	-0.1
1,977,886	-		MPMX19_01895	0.48	-0.9
1,977,886	-		MPMX19_01895	0.48	+0.0
1,977,886	-		MPMX19_01895	0.48	+0.6
1,977,886	-		MPMX19_01895	0.48	+0.2
1,977,886	-		MPMX19_01895	0.48	-0.0
1,977,886	-		MPMX19_01895	0.48	-0.9
1,978,263	+		MPMX19_01896	0.11	-0.0
1,978,263	+		MPMX19_01896	0.11	-1.2
1,978,264	-		MPMX19_01896	0.11	-0.3
1,978,264	-		MPMX19_01896	0.11	+0.0
1,978,265	+		MPMX19_01896	0.11	-0.0
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	-0.9
1,978,265	+		MPMX19_01896	0.11	+1.2
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+0.1
1,978,265	+		MPMX19_01896	0.11	-1.9
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+1.0
1,978,266	-		MPMX19_01896	0.11	+0.4
1,978,266	-		MPMX19_01896	0.11	-1.2
1,978,266	-		MPMX19_01896	0.11	-0.7
1,978,266	-		MPMX19_01896	0.11	-0.1
1,978,266	-		MPMX19_01896	0.11	+0.1
1,978,266	-		MPMX19_01896	0.11	-1.6
1,978,266	-		MPMX19_01896	0.11	+0.8
1,978,266	-		MPMX19_01896	0.11	-1.4
1,978,266	-		MPMX19_01896	0.11	-0.3
1,978,266	-		MPMX19_01896	0.11	+0.4
1,978,301	+		MPMX19_01896	0.14	-1.0
1,978,301	+		MPMX19_01896	0.14	+0.8
1,978,301	+		MPMX19_01896	0.14	-2.0
1,978,301	+		MPMX19_01896	0.14	+0.6
1,978,301	+		MPMX19_01896	0.14	-0.3
1,978,302	-		MPMX19_01896	0.14	-0.3
1,978,302	-		MPMX19_01896	0.14	-2.8
1,978,302	-		MPMX19_01896	0.14	-0.6
1,978,302	-		MPMX19_01896	0.14	-0.2
1,978,535	+		MPMX19_01896	0.33	-1.2
1,978,535	+		MPMX19_01896	0.33	-0.2
1,978,535	+		MPMX19_01896	0.33	-0.1
1,978,535	+		MPMX19_01896	0.33	+1.6
1,978,535	+		MPMX19_01896	0.33	+1.8
1,978,535	+		MPMX19_01896	0.33	-0.7
1,978,535	+		MPMX19_01896	0.33	+0.4
1,978,536	-		MPMX19_01896	0.33	-1.3
1,978,536	-		MPMX19_01896	0.33	+1.0
1,978,536	-		MPMX19_01896	0.33	-0.6
1,978,536	-		MPMX19_01896	0.33	-1.2
1,978,536	-		MPMX19_01896	0.33	-0.7
1,978,697	+		MPMX19_01896	0.47	+0.5
1,978,698	-		MPMX19_01896	0.47	+0.5
1,978,698	-		MPMX19_01896	0.47	-1.2
1,978,698	-		MPMX19_01896	0.47	-0.5
1,978,698	-		MPMX19_01896	0.47	-0.6
1,978,698	-		MPMX19_01896	0.47	+0.2
1,978,698	-		MPMX19_01896	0.47	+0.4
1,978,757	+		MPMX19_01896	0.52	-1.0
1,978,757	+		MPMX19_01896	0.52	-0.2
1,978,757	+		MPMX19_01896	0.52	+1.0
1,978,757	+		MPMX19_01896	0.52	+0.6
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,758	-		MPMX19_01896	0.52	+2.3
1,978,758	-		MPMX19_01896	0.52	+0.8
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,793	+		MPMX19_01896	0.54	-0.2
1,978,838	+		MPMX19_01896	0.58	-0.2
1,978,838	+		MPMX19_01896	0.58	+0.1
1,978,838	+		MPMX19_01896	0.58	-1.4
1,978,838	+		MPMX19_01896	0.58	-1.0
1,978,839	-		MPMX19_01896	0.58	-0.8
1,978,839	-		MPMX19_01896	0.58	-0.2
1,978,839	-		MPMX19_01896	0.58	-0.7
1,978,839	-		MPMX19_01896	0.58	-0.4
1,978,839	-		MPMX19_01896	0.58	-0.2
1,978,839	-		MPMX19_01896	0.58	+0.1
1,978,952	+		MPMX19_01896	0.67	+1.1
1,978,952	+		MPMX19_01896	0.67	+1.7
1,978,952	+		MPMX19_01896	0.67	+1.0
1,978,952	+		MPMX19_01896	0.67	+0.5
1,978,952	+		MPMX19_01896	0.67	+0.8
1,978,952	+		MPMX19_01896	0.67	+0.6
1,978,952	+		MPMX19_01896	0.67	+1.4
1,978,952	+		MPMX19_01896	0.67	+0.7
1,978,953	-		MPMX19_01896	0.68	-0.8
1,978,953	-		MPMX19_01896	0.68	+0.1
1,978,953	-		MPMX19_01896	0.68	-0.1
1,978,953	-		MPMX19_01896	0.68	+0.2
1,978,953	-		MPMX19_01896	0.68	+0.6
1,978,953	-		MPMX19_01896	0.68	+1.1
1,979,398	+				+0.0
1,979,398	+				-0.2
1,979,398	+				-0.2
1,979,398	+				-1.6
1,979,398	+				-0.0
1,979,398	+				+0.2
1,979,399	-				-0.1
1,979,399	-				-0.4
1,979,399	-				+1.6
1,979,399	-				+0.6
1,979,399	-				+0.5
1,979,399	-				-0.9
1,979,399	-				-2.2
1,979,399	-				-1.2
1,979,399	-				+0.1
1,979,399	-				-0.9
1,979,462	-				-1.0
1,979,520	-				-0.7
1,979,520	-				-0.8
1,979,520	-				+0.8
1,979,534	-				+0.1
1,979,534	-				+0.1
1,979,773	+		MPMX19_01897	0.14	+0.1
1,979,773	+		MPMX19_01897	0.14	-1.3
1,979,773	+		MPMX19_01897	0.14	-0.0
1,979,773	+		MPMX19_01897	0.14	-1.0
1,979,773	+		MPMX19_01897	0.14	-1.0
1,979,773	+		MPMX19_01897	0.14	-0.8
1,979,773	+		MPMX19_01897	0.14	-0.4
1,979,773	+		MPMX19_01897	0.14	-0.7
1,979,773	+		MPMX19_01897	0.14	-0.0
1,979,773	+		MPMX19_01897	0.14	+0.2
1,979,774	-		MPMX19_01897	0.14	+0.1
1,979,774	-		MPMX19_01897	0.14	-0.3
1,979,774	-		MPMX19_01897	0.14	-0.8
1,979,774	-		MPMX19_01897	0.14	+0.6
1,979,774	-		MPMX19_01897	0.14	-0.4
1,979,774	-		MPMX19_01897	0.14	-0.4
1,979,815	+		MPMX19_01897	0.16	-0.8
1,979,815	+		MPMX19_01897	0.16	-0.4
1,979,815	+		MPMX19_01897	0.16	-1.6
1,979,815	+		MPMX19_01897	0.16	-0.4
1,979,815	+		MPMX19_01897	0.16	-0.4
1,979,815	+		MPMX19_01897	0.16	-0.6
1,979,816	-		MPMX19_01897	0.16	-1.4
1,979,816	-		MPMX19_01897	0.16	-1.0
1,979,816	-		MPMX19_01897	0.16	-0.6
1,979,816	-		MPMX19_01897	0.16	-1.6
1,979,816	-		MPMX19_01897	0.16	+0.7
1,979,816	-		MPMX19_01897	0.16	-1.0
1,979,816	-		MPMX19_01897	0.16	-0.4
1,979,860	+		MPMX19_01897	0.19	-1.0
1,979,860	+		MPMX19_01897	0.19	-0.6
1,979,861	-		MPMX19_01897	0.19	-1.3
1,979,861	-		MPMX19_01897	0.19	-2.4
1,979,861	-		MPMX19_01897	0.19	-0.3
1,979,892	+		MPMX19_01897	0.21	-1.2
1,979,892	+		MPMX19_01897	0.21	-0.5
1,979,893	-		MPMX19_01897	0.21	-0.8
1,979,914	+		MPMX19_01897	0.22	+0.8
1,979,914	+		MPMX19_01897	0.22	+1.0
1,979,914	+		MPMX19_01897	0.22	+0.3
1,979,914	+		MPMX19_01897	0.22	-0.6
1,979,914	+		MPMX19_01897	0.22	+0.3
1,979,914	+		MPMX19_01897	0.22	+0.1
1,979,914	+		MPMX19_01897	0.22	-0.5
1,979,914	+		MPMX19_01897	0.22	+0.4
1,979,914	+		MPMX19_01897	0.22	-0.3
1,979,914	+		MPMX19_01897	0.22	+0.2
1,979,914	+		MPMX19_01897	0.22	-0.4
1,979,914	+		MPMX19_01897	0.22	+0.6
1,979,914	+		MPMX19_01897	0.22	-0.1
1,979,914	+		MPMX19_01897	0.22	-1.0
1,979,914	+		MPMX19_01897	0.22	-0.3
1,979,915	-		MPMX19_01897	0.22	-0.3
1,979,915	-		MPMX19_01897	0.22	-1.4
1,979,915	-		MPMX19_01897	0.22	+0.4
1,979,915	-		MPMX19_01897	0.22	-0.8
1,979,915	-		MPMX19_01897	0.22	-2.3
1,979,915	-		MPMX19_01897	0.22	-0.5
1,979,915	-		MPMX19_01897	0.22	-0.8
1,979,915	-		MPMX19_01897	0.22	-1.6
1,979,915	-		MPMX19_01897	0.22	-0.9
1,979,915	-		MPMX19_01897	0.22	-0.6
1,979,915	-		MPMX19_01897	0.22	-0.0
1,979,915	-		MPMX19_01897	0.22	+0.2
1,979,915	-		MPMX19_01897	0.22	+1.6
1,979,917	+		MPMX19_01897	0.22	+0.2
1,979,917	+		MPMX19_01897	0.22	-1.6
1,979,917	+		MPMX19_01897	0.22	-1.8
1,979,917	+		MPMX19_01897	0.22	+0.5
1,979,917	+		MPMX19_01897	0.22	-0.4
1,979,918	-		MPMX19_01897	0.22	+0.3
1,979,918	-		MPMX19_01897	0.22	-0.2
1,979,918	-		MPMX19_01897	0.22	+0.1
1,979,918	-		MPMX19_01897	0.22	-0.4
1,979,923	+		MPMX19_01897	0.23	-1.3
1,979,923	+		MPMX19_01897	0.23	-1.9
1,979,923	+		MPMX19_01897	0.23	+0.6
1,979,923	+		MPMX19_01897	0.23	-0.3
1,979,923	+		MPMX19_01897	0.23	-0.9
1,979,923	+		MPMX19_01897	0.23	-1.8
1,979,923	+		MPMX19_01897	0.23	-0.8
1,979,924	-		MPMX19_01897	0.23	-1.0
1,979,924	-		MPMX19_01897	0.23	-1.6
1,979,924	-		MPMX19_01897	0.23	-1.0
1,979,924	-		MPMX19_01897	0.23	-0.2
1,979,924	-		MPMX19_01897	0.23	-0.4
1,979,924	-		MPMX19_01897	0.23	-0.8
1,979,924	-		MPMX19_01897	0.23	-1.3
1,979,924	-		MPMX19_01897	0.23	+1.1
1,979,959	+		MPMX19_01897	0.25	+1.2
1,979,959	+		MPMX19_01897	0.25	+0.8
1,979,959	+		MPMX19_01897	0.25	+0.6
1,979,959	+		MPMX19_01897	0.25	+0.1
1,979,959	+		MPMX19_01897	0.25	+0.1
1,979,959	+		MPMX19_01897	0.25	+0.1
1,979,959	+		MPMX19_01897	0.25	-0.4
1,979,959	+		MPMX19_01897	0.25	-0.6
1,979,959	+		MPMX19_01897	0.25	-1.0
1,979,959	+		MPMX19_01897	0.25	+0.6
1,979,959	+		MPMX19_01897	0.25	+0.3
1,979,959	+		MPMX19_01897	0.25	+0.7
1,979,959	+		MPMX19_01897	0.25	-1.9
1,979,959	+		MPMX19_01897	0.25	-3.0
1,979,959	+		MPMX19_01897	0.25	-0.4
1,979,959	+		MPMX19_01897	0.25	+0.3
1,979,959	+		MPMX19_01897	0.25	+0.6
1,979,959	+		MPMX19_01897	0.25	-0.2
1,979,959	+		MPMX19_01897	0.25	+0.8
1,979,959	+		MPMX19_01897	0.25	-1.9
1,979,959	+		MPMX19_01897	0.25	-0.6
1,979,960	-		MPMX19_01897	0.25	-0.0
1,979,960	-		MPMX19_01897	0.25	-0.2
1,979,960	-		MPMX19_01897	0.25	-1.4
1,979,960	-		MPMX19_01897	0.25	+0.4
1,979,960	-		MPMX19_01897	0.25	-0.9
1,979,960	-		MPMX19_01897	0.25	-0.4
1,979,960	-		MPMX19_01897	0.25	+0.3
1,979,960	-		MPMX19_01897	0.25	-1.3
1,979,960	-		MPMX19_01897	0.25	+0.4
1,979,960	-		MPMX19_01897	0.25	-0.6
1,979,960	-		MPMX19_01897	0.25	-1.4
1,979,960	-		MPMX19_01897	0.25	-1.3
1,979,960	-		MPMX19_01897	0.25	-0.4
1,979,960	-		MPMX19_01897	0.25	-0.3
1,979,960	-		MPMX19_01897	0.25	-0.0
1,979,960	-		MPMX19_01897	0.25	-1.0
1,979,960	-		MPMX19_01897	0.25	+0.4
1,979,960	-		MPMX19_01897	0.25	-2.0
1,979,960	-		MPMX19_01897	0.25	+1.3
1,979,960	-		MPMX19_01897	0.25	-0.8
1,979,960	-		MPMX19_01897	0.25	+0.1
1,979,960	-		MPMX19_01897	0.25	+0.2
1,979,960	-		MPMX19_01897	0.25	-0.0
1,979,960	-		MPMX19_01897	0.25	-0.9
1,979,960	-		MPMX19_01897	0.25	+1.7
1,979,960	-		MPMX19_01897	0.25	+2.0
1,979,960	-		MPMX19_01897	0.25	-0.4
1,979,960	-		MPMX19_01897	0.25	+0.2
1,979,960	-		MPMX19_01897	0.25	-0.8
1,979,960	-		MPMX19_01897	0.25	+2.3
1,979,960	-		MPMX19_01897	0.25	-1.3
1,979,960	-		MPMX19_01897	0.25	+0.6
1,980,109	+		MPMX19_01897	0.33	-0.0
1,980,109	+		MPMX19_01897	0.33	+0.4
1,980,109	+		MPMX19_01897	0.33	-1.6
1,980,109	+		MPMX19_01897	0.33	-0.9
1,980,109	+		MPMX19_01897	0.33	-1.0
1,980,109	+		MPMX19_01897	0.33	-0.0
1,980,109	+		MPMX19_01897	0.33	+0.2
1,980,110	-		MPMX19_01897	0.33	+1.2
1,980,173	+		MPMX19_01897	0.37	+0.6
1,980,173	+		MPMX19_01897	0.37	-0.3
1,980,173	+		MPMX19_01897	0.37	-0.9
1,980,174	-		MPMX19_01897	0.37	-0.1
1,980,174	-		MPMX19_01897	0.37	-1.3
1,980,175	+		MPMX19_01897	0.37	-0.3
1,980,175	+		MPMX19_01897	0.37	+0.2
1,980,175	+		MPMX19_01897	0.37	+0.7
1,980,175	+		MPMX19_01897	0.37	-1.4
1,980,176	-		MPMX19_01897	0.37	-1.3
1,980,176	-		MPMX19_01897	0.37	-1.0
1,980,176	-		MPMX19_01897	0.37	-1.4
1,980,176	-		MPMX19_01897	0.37	-0.8
1,980,295	+		MPMX19_01897	0.44	-0.8
1,980,295	+		MPMX19_01897	0.44	-0.3
1,980,295	+		MPMX19_01897	0.44	+1.1
1,980,295	+		MPMX19_01897	0.44	+1.6
1,980,295	+		MPMX19_01897	0.44	+0.6
1,980,295	+		MPMX19_01897	0.44	-1.4
1,980,295	+		MPMX19_01897	0.44	-1.0
1,980,295	+		MPMX19_01897	0.44	-2.6
1,980,296	-		MPMX19_01897	0.44	-1.5
1,980,296	-		MPMX19_01897	0.44	+1.3
1,980,296	-		MPMX19_01897	0.44	+1.9
1,980,296	-		MPMX19_01897	0.44	+0.4
1,980,296	-		MPMX19_01897	0.44	-1.5
1,980,296	-		MPMX19_01897	0.44	-1.0
1,980,307	+		MPMX19_01897	0.45	+0.2
1,980,307	+		MPMX19_01897	0.45	+0.2
1,980,307	+		MPMX19_01897	0.45	+1.0
1,980,307	+		MPMX19_01897	0.45	-0.4
1,980,307	+		MPMX19_01897	0.45	-1.0
1,980,307	+		MPMX19_01897	0.45	-2.5
1,980,307	+		MPMX19_01897	0.45	+0.4
1,980,307	+		MPMX19_01897	0.45	+1.2
1,980,307	+		MPMX19_01897	0.45	+0.1
1,980,307	+		MPMX19_01897	0.45	+0.8
1,980,307	+		MPMX19_01897	0.45	-1.8
1,980,308	-		MPMX19_01897	0.45	-0.0
1,980,308	-		MPMX19_01897	0.45	-0.1
1,980,308	-		MPMX19_01897	0.45	-1.7
1,980,308	-		MPMX19_01897	0.45	+0.3
1,980,308	-		MPMX19_01897	0.45	+0.0
1,980,308	-		MPMX19_01897	0.45	-0.2
1,980,308	-		MPMX19_01897	0.45	+0.9
1,980,308	-		MPMX19_01897	0.45	-0.4
1,980,308	-		MPMX19_01897	0.45	-1.0
1,980,308	-		MPMX19_01897	0.45	+0.1
1,980,308	-		MPMX19_01897	0.45	-0.2