Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01895

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,976,707	+		MPMX19_01894	0.17	-1.4
1,976,707	+		MPMX19_01894	0.17	-0.3
1,976,707	+		MPMX19_01894	0.17	-0.0
1,976,707	+		MPMX19_01894	0.17	+0.7
1,976,707	+		MPMX19_01894	0.17	-0.4
1,976,707	+		MPMX19_01894	0.17	-0.8
1,976,707	+		MPMX19_01894	0.17	+0.0
1,976,707	+		MPMX19_01894	0.17	-0.1
1,976,707	+		MPMX19_01894	0.17	-0.5
1,976,707	+		MPMX19_01894	0.17	-1.2
1,976,707	+		MPMX19_01894	0.17	+0.6
1,976,707	+		MPMX19_01894	0.17	-0.7
1,976,707	+		MPMX19_01894	0.17	+2.4
1,976,707	+		MPMX19_01894	0.17	+0.5
1,976,707	+		MPMX19_01894	0.17	-1.9
1,976,708	-		MPMX19_01894	0.17	-0.1
1,976,708	-		MPMX19_01894	0.17	-1.6
1,976,708	-		MPMX19_01894	0.17	-0.7
1,976,708	-		MPMX19_01894	0.17	+1.3
1,976,708	-		MPMX19_01894	0.17	-0.7
1,976,708	-		MPMX19_01894	0.17	-0.4
1,976,708	-		MPMX19_01894	0.17	-0.3
1,976,708	-		MPMX19_01894	0.17	+1.1
1,976,708	-		MPMX19_01894	0.17	-0.0
1,976,708	-		MPMX19_01894	0.17	-1.6
1,976,708	-		MPMX19_01894	0.17	-0.6
1,977,614	+				+1.0
1,977,614	+				-0.3
1,977,614	+				-1.0
1,977,614	+				+0.6
1,977,614	+				+0.4
1,977,614	+				-1.0
1,977,615	-				-0.0
1,977,615	-				+0.6
1,977,615	-				+0.8
1,977,615	-				-1.4
1,977,615	-				-0.0
1,977,615	-				-0.3
1,977,615	-				-0.6
1,977,730	+		MPMX19_01895	0.10	-0.4
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	+0.1
1,977,730	+		MPMX19_01895	0.10	+0.3
1,977,730	+		MPMX19_01895	0.10	-0.4
1,977,730	+		MPMX19_01895	0.10	-0.8
1,977,730	+		MPMX19_01895	0.10	-0.7
1,977,730	+		MPMX19_01895	0.10	+0.6
1,977,730	+		MPMX19_01895	0.10	+0.0
1,977,730	+		MPMX19_01895	0.10	+0.2
1,977,730	+		MPMX19_01895	0.10	+0.1
1,977,730	+		MPMX19_01895	0.10	-1.2
1,977,731	-		MPMX19_01895	0.10	-1.6
1,977,731	-		MPMX19_01895	0.10	-0.6
1,977,731	-		MPMX19_01895	0.10	+1.2
1,977,731	-		MPMX19_01895	0.10	-0.9
1,977,731	-		MPMX19_01895	0.10	+0.3
1,977,731	-		MPMX19_01895	0.10	+0.4
1,977,731	-		MPMX19_01895	0.10	-1.0
1,977,731	-		MPMX19_01895	0.10	-0.8
1,977,731	-		MPMX19_01895	0.10	-0.2
1,977,731	-		MPMX19_01895	0.10	+0.1
1,977,731	-		MPMX19_01895	0.10	-0.9
1,977,731	-		MPMX19_01895	0.10	-0.6
1,977,731	-		MPMX19_01895	0.10	-0.1
1,977,731	-		MPMX19_01895	0.10	-1.1
1,977,731	-		MPMX19_01895	0.10	-0.4
1,977,885	+		MPMX19_01895	0.48	+0.7
1,977,885	+		MPMX19_01895	0.48	-0.2
1,977,885	+		MPMX19_01895	0.48	-0.6
1,977,885	+		MPMX19_01895	0.48	-1.2
1,977,885	+		MPMX19_01895	0.48	-0.4
1,977,886	-		MPMX19_01895	0.48	-0.0
1,977,886	-		MPMX19_01895	0.48	-0.1
1,977,886	-		MPMX19_01895	0.48	-0.9
1,977,886	-		MPMX19_01895	0.48	+0.0
1,977,886	-		MPMX19_01895	0.48	+0.6
1,977,886	-		MPMX19_01895	0.48	+0.2
1,977,886	-		MPMX19_01895	0.48	-0.0
1,977,886	-		MPMX19_01895	0.48	-0.9
1,978,263	+		MPMX19_01896	0.11	-0.0
1,978,263	+		MPMX19_01896	0.11	-1.2
1,978,264	-		MPMX19_01896	0.11	-0.3
1,978,264	-		MPMX19_01896	0.11	+0.0
1,978,265	+		MPMX19_01896	0.11	-0.0
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	-0.9
1,978,265	+		MPMX19_01896	0.11	+1.2
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+0.1
1,978,265	+		MPMX19_01896	0.11	-1.9
1,978,265	+		MPMX19_01896	0.11	+0.2
1,978,265	+		MPMX19_01896	0.11	+1.0
1,978,266	-		MPMX19_01896	0.11	+0.4
1,978,266	-		MPMX19_01896	0.11	-1.2
1,978,266	-		MPMX19_01896	0.11	-0.7
1,978,266	-		MPMX19_01896	0.11	-0.1
1,978,266	-		MPMX19_01896	0.11	+0.1
1,978,266	-		MPMX19_01896	0.11	-1.6
1,978,266	-		MPMX19_01896	0.11	+0.8
1,978,266	-		MPMX19_01896	0.11	-1.4
1,978,266	-		MPMX19_01896	0.11	-0.3
1,978,266	-		MPMX19_01896	0.11	+0.4
1,978,301	+		MPMX19_01896	0.14	-1.0
1,978,301	+		MPMX19_01896	0.14	+0.8
1,978,301	+		MPMX19_01896	0.14	-2.0
1,978,301	+		MPMX19_01896	0.14	+0.6
1,978,301	+		MPMX19_01896	0.14	-0.3
1,978,302	-		MPMX19_01896	0.14	-0.3
1,978,302	-		MPMX19_01896	0.14	-2.8
1,978,302	-		MPMX19_01896	0.14	-0.6
1,978,302	-		MPMX19_01896	0.14	-0.2
1,978,535	+		MPMX19_01896	0.33	-1.2
1,978,535	+		MPMX19_01896	0.33	-0.2
1,978,535	+		MPMX19_01896	0.33	-0.1
1,978,535	+		MPMX19_01896	0.33	+1.6
1,978,535	+		MPMX19_01896	0.33	+1.8
1,978,535	+		MPMX19_01896	0.33	-0.7
1,978,535	+		MPMX19_01896	0.33	+0.4
1,978,536	-		MPMX19_01896	0.33	-1.3
1,978,536	-		MPMX19_01896	0.33	+1.0
1,978,536	-		MPMX19_01896	0.33	-0.6
1,978,536	-		MPMX19_01896	0.33	-1.2
1,978,536	-		MPMX19_01896	0.33	-0.7
1,978,697	+		MPMX19_01896	0.47	+0.5
1,978,698	-		MPMX19_01896	0.47	+0.5
1,978,698	-		MPMX19_01896	0.47	-1.2
1,978,698	-		MPMX19_01896	0.47	-0.5
1,978,698	-		MPMX19_01896	0.47	-0.6
1,978,698	-		MPMX19_01896	0.47	+0.2
1,978,698	-		MPMX19_01896	0.47	+0.4
1,978,757	+		MPMX19_01896	0.52	-1.0
1,978,757	+		MPMX19_01896	0.52	-0.2
1,978,757	+		MPMX19_01896	0.52	+1.0
1,978,757	+		MPMX19_01896	0.52	+0.6
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,758	-		MPMX19_01896	0.52	+2.3
1,978,758	-		MPMX19_01896	0.52	+0.8
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,758	-		MPMX19_01896	0.52	-0.3
1,978,793	+		MPMX19_01896	0.54	-0.2
1,978,838	+		MPMX19_01896	0.58	-0.2
1,978,838	+		MPMX19_01896	0.58	+0.1
1,978,838	+		MPMX19_01896	0.58	-1.4
1,978,838	+		MPMX19_01896	0.58	-1.0
1,978,839	-		MPMX19_01896	0.58	-0.8
1,978,839	-		MPMX19_01896	0.58	-0.2
1,978,839	-		MPMX19_01896	0.58	-0.7
1,978,839	-		MPMX19_01896	0.58	-0.4
1,978,839	-		MPMX19_01896	0.58	-0.2
1,978,839	-		MPMX19_01896	0.58	+0.1
1,978,952	+		MPMX19_01896	0.67	+1.1
1,978,952	+		MPMX19_01896	0.67	+1.7
1,978,952	+		MPMX19_01896	0.67	+1.0
1,978,952	+		MPMX19_01896	0.67	+0.5
1,978,952	+		MPMX19_01896	0.67	+0.8
1,978,952	+		MPMX19_01896	0.67	+0.6
1,978,952	+		MPMX19_01896	0.67	+1.4
1,978,952	+		MPMX19_01896	0.67	+0.7
1,978,953	-		MPMX19_01896	0.68	-0.8
1,978,953	-		MPMX19_01896	0.68	+0.1
1,978,953	-		MPMX19_01896	0.68	-0.1
1,978,953	-		MPMX19_01896	0.68	+0.2
1,978,953	-		MPMX19_01896	0.68	+0.6
1,978,953	-		MPMX19_01896	0.68	+1.1