Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01561

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,638,701	-		MPMX19_01560	0.27	-2.5
1,638,704	-		MPMX19_01560	0.27	-0.0
1,638,789	-		MPMX19_01560	0.36	-2.9
1,639,048	+		MPMX19_01560	0.65	-0.8
1,639,064	+		MPMX19_01560	0.67	-1.8
1,639,064	+		MPMX19_01560	0.67	-2.3
1,639,065	-		MPMX19_01560	0.67	-2.4
1,639,273	-				-2.8
1,639,317	+				-1.1
1,639,337	+				-1.3
1,639,391	+				-0.8
1,639,420	+				+0.5
1,639,420	+				-0.2
1,639,420	+				+0.5
1,639,421	-				-1.3
1,639,421	-				-3.6
1,639,514	+				-1.2
1,639,563	-				+1.0
1,639,629	+		MPMX19_01561	0.14	-0.4
1,639,629	+		MPMX19_01561	0.14	-1.6
1,639,630	-		MPMX19_01561	0.14	-0.1
1,639,630	-		MPMX19_01561	0.14	+0.8
1,639,697	-		MPMX19_01561	0.26	-1.3
1,639,697	-		MPMX19_01561	0.26	-1.8
1,639,697	-		MPMX19_01561	0.26	-0.7
1,639,697	-		MPMX19_01561	0.26	+1.0
1,639,697	-		MPMX19_01561	0.26	-0.2
1,639,697	-		MPMX19_01561	0.26	-2.4
1,639,697	-		MPMX19_01561	0.26	-0.6
1,639,697	-		MPMX19_01561	0.26	+0.2
1,639,697	-		MPMX19_01561	0.26	-0.2
1,639,883	-		MPMX19_01561	0.60	-0.7
1,639,965	-		MPMX19_01561	0.74	+0.5
1,639,965	-		MPMX19_01561	0.74	-0.1
1,639,965	-		MPMX19_01561	0.74	+0.7
1,639,965	-		MPMX19_01561	0.74	-1.2
1,639,965	-		MPMX19_01561	0.74	+1.1
1,639,965	-		MPMX19_01561	0.74	-2.4
1,639,965	-		MPMX19_01561	0.74	-0.9
1,639,965	-		MPMX19_01561	0.74	+0.9
1,639,965	-		MPMX19_01561	0.74	-0.8
1,639,965	-		MPMX19_01561	0.74	-1.6
1,639,965	-		MPMX19_01561	0.74	-1.6
1,639,965	-		MPMX19_01561	0.74	-0.2
1,640,007	+		MPMX19_01561	0.82	-0.9
1,640,007	+		MPMX19_01561	0.82	+0.5
1,640,007	+		MPMX19_01561	0.82	-0.3
1,640,007	+		MPMX19_01561	0.82	-0.2
1,640,007	+		MPMX19_01561	0.82	-0.7
1,640,007	+		MPMX19_01561	0.82	-0.1
1,640,007	+		MPMX19_01561	0.82	-0.5
1,640,007	+		MPMX19_01561	0.82	-0.5
1,640,007	+		MPMX19_01561	0.82	+0.2
1,640,007	+		MPMX19_01561	0.82	+1.2
1,640,007	+		MPMX19_01561	0.82	-1.5
1,640,007	+		MPMX19_01561	0.82	+0.2
1,640,007	+		MPMX19_01561	0.82	+1.5
1,640,007	+		MPMX19_01561	0.82	-0.1
1,640,007	+		MPMX19_01561	0.82	-0.5
1,640,007	+		MPMX19_01561	0.82	-2.1
1,640,007	+		MPMX19_01561	0.82	-0.8
1,640,007	+		MPMX19_01561	0.82	+0.7
1,640,007	+		MPMX19_01561	0.82	-0.6
1,640,007	+		MPMX19_01561	0.82	-1.1
1,640,046	+		MPMX19_01561	0.89	+0.4
1,640,046	+		MPMX19_01561	0.89	-0.3
1,640,047	-		MPMX19_01561	0.89	-1.1
1,640,081	+				-0.3
1,640,082	-				-1.5
1,640,082	-				+0.5
1,640,082	-				+0.0
1,640,082	-				+0.2
1,640,128	+				+0.3
1,640,129	-				-0.9
1,640,129	-				-1.5
1,640,215	+				-0.1
1,640,216	-				-0.8
1,640,247	-				-1.6
1,640,247	-				-0.3
1,640,247	-				-1.3
1,640,247	-				-0.3
1,640,247	-				-0.2
1,640,257	+				-0.7
1,640,358	+		MPMX19_01562	0.15	-0.2
1,640,358	+		MPMX19_01562	0.15	-0.8
1,640,358	+		MPMX19_01562	0.15	-0.1
1,640,358	+		MPMX19_01562	0.15	-1.3
1,640,358	+		MPMX19_01562	0.15	-0.8
1,640,359	-		MPMX19_01562	0.15	-0.2
1,640,359	-		MPMX19_01562	0.15	-0.3
1,640,359	-		MPMX19_01562	0.15	+1.1
1,640,371	+		MPMX19_01562	0.17	+0.3
1,640,371	+		MPMX19_01562	0.17	-0.2
1,640,372	-		MPMX19_01562	0.17	+0.8
1,640,372	-		MPMX19_01562	0.17	-1.1
1,640,380	+		MPMX19_01562	0.19	+0.1
1,640,380	+		MPMX19_01562	0.19	-0.5
1,640,380	+		MPMX19_01562	0.19	+1.5
1,640,380	+		MPMX19_01562	0.19	-1.3
1,640,380	+		MPMX19_01562	0.19	-0.6
1,640,380	+		MPMX19_01562	0.19	-1.1
1,640,380	+		MPMX19_01562	0.19	-0.7
1,640,380	+		MPMX19_01562	0.19	+0.5
1,640,380	+		MPMX19_01562	0.19	+1.5
1,640,381	-		MPMX19_01562	0.19	-0.7
1,640,381	-		MPMX19_01562	0.19	-1.1
1,640,381	-		MPMX19_01562	0.19	-0.1
1,640,381	-		MPMX19_01562	0.19	+0.4
1,640,381	-		MPMX19_01562	0.19	-1.7
1,640,381	-		MPMX19_01562	0.19	-0.6
1,640,460	+		MPMX19_01562	0.33	-0.5
1,640,460	+		MPMX19_01562	0.33	-1.5
1,640,460	+		MPMX19_01562	0.33	-1.6
1,640,555	+		MPMX19_01562	0.50	-1.6
1,640,555	+		MPMX19_01562	0.50	+0.9
1,640,555	+		MPMX19_01562	0.50	-0.8
1,640,555	+		MPMX19_01562	0.50	-0.3
1,640,555	+		MPMX19_01562	0.50	-0.6
1,640,555	+		MPMX19_01562	0.50	-0.1
1,640,555	+		MPMX19_01562	0.50	+0.2
1,640,555	+		MPMX19_01562	0.50	+0.5
1,640,556	-		MPMX19_01562	0.51	+1.9
1,640,556	-		MPMX19_01562	0.51	-0.6
1,640,556	-		MPMX19_01562	0.51	-1.0
1,640,556	-		MPMX19_01562	0.51	-0.5
1,640,556	-		MPMX19_01562	0.51	-1.8
1,640,557	+		MPMX19_01562	0.51	-2.3
1,640,557	+		MPMX19_01562	0.51	-0.1
1,640,557	+		MPMX19_01562	0.51	-1.4
1,640,557	+		MPMX19_01562	0.51	+0.8
1,640,557	+		MPMX19_01562	0.51	+0.5
1,640,557	+		MPMX19_01562	0.51	-1.0
1,640,558	-		MPMX19_01562	0.51	-1.6
1,640,558	-		MPMX19_01562	0.51	-1.1
1,640,558	-		MPMX19_01562	0.51	-1.3
1,640,558	-		MPMX19_01562	0.51	+0.0
1,640,558	-		MPMX19_01562	0.51	+0.1
1,640,558	-		MPMX19_01562	0.51	-0.9
1,640,558	-		MPMX19_01562	0.51	-0.2
1,640,558	-		MPMX19_01562	0.51	-1.3
1,640,580	+		MPMX19_01562	0.55	-1.3
1,640,580	+		MPMX19_01562	0.55	-3.2
1,640,580	+		MPMX19_01562	0.55	+0.4
1,640,580	+		MPMX19_01562	0.55	+0.9
1,640,581	-		MPMX19_01562	0.55	-1.1
1,640,581	-		MPMX19_01562	0.55	-2.1
1,640,581	-		MPMX19_01562	0.55	+0.3
1,640,629	+		MPMX19_01562	0.64	-0.1
1,640,629	+		MPMX19_01562	0.64	-2.5
1,640,630	-		MPMX19_01562	0.64	-0.5
1,640,630	-		MPMX19_01562	0.64	-3.0
1,640,630	-		MPMX19_01562	0.64	-0.2
1,640,878	+				-1.1
1,640,878	+				+0.2
1,640,878	+				-1.0
1,640,878	+				-1.1
1,640,878	+				-0.7
1,640,878	+				+0.5
1,640,879	-				+1.0
1,640,879	-				-0.2
1,640,919	-				+0.5
1,640,919	-				-1.6
1,640,919	-				+1.2
1,640,921	-				-0.1
1,640,921	-				-0.6
1,640,921	-				+0.2
1,640,921	-				-0.4
1,640,921	-				+0.3
1,640,921	-				+1.4
1,640,921	-				+0.7
1,640,921	-				-0.8
1,640,921	-				-0.8
1,640,921	-				+0.9
1,640,921	-				-0.1
1,640,921	-				+0.3
1,640,921	-				-1.0
1,640,921	-				+0.5
1,640,921	-				-0.6
1,640,921	-				-0.2
1,640,921	-				-1.3
1,640,921	-				-0.1
1,640,921	-				-0.2
1,640,921	-				+0.5
1,640,921	-				-1.8
1,640,921	-				-0.4
1,640,921	-				-2.3
1,640,921	-				-2.2
1,640,921	-				-1.5
1,640,921	-				-1.6
1,640,921	-				+0.7
1,640,921	-				+0.3
1,640,921	-				-0.6
1,640,921	-				-0.9
1,640,921	-				+0.4
1,640,921	-				+0.5
1,640,921	-				-2.5
1,640,921	-				-2.4
1,640,931	-				+0.2