Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01108

Experiment: NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. HT1-2 2:1 starting OD to Azospirillum
1,140,553	+				-0.8
1,140,553	+				-1.4
1,140,749	+		MPMX19_01106	0.69	+0.6
1,140,822	+				-0.6
1,140,822	+				-1.4
1,140,947	+		MPMX19_01107	0.19	-1.0
1,140,947	+		MPMX19_01107	0.19	+0.6
1,140,947	+		MPMX19_01107	0.19	+0.9
1,140,947	+		MPMX19_01107	0.19	-1.7
1,140,947	+		MPMX19_01107	0.19	+0.0
1,140,947	+		MPMX19_01107	0.19	+0.9
1,140,947	+		MPMX19_01107	0.19	+1.3
1,140,947	+		MPMX19_01107	0.19	+0.2
1,140,947	+		MPMX19_01107	0.19	-1.9
1,140,947	+		MPMX19_01107	0.19	+1.2
1,140,948	-		MPMX19_01107	0.19	-0.9
1,140,948	-		MPMX19_01107	0.19	+1.1
1,140,948	-		MPMX19_01107	0.19	+0.6
1,140,948	-		MPMX19_01107	0.19	-1.0
1,140,948	-		MPMX19_01107	0.19	-1.4
1,140,948	-		MPMX19_01107	0.19	-1.4
1,140,948	-		MPMX19_01107	0.19	+0.3
1,140,948	-		MPMX19_01107	0.19	+0.3
1,140,948	-		MPMX19_01107	0.19	-0.4
1,140,948	-		MPMX19_01107	0.19	+0.2
1,140,948	-		MPMX19_01107	0.19	-2.1
1,140,948	-		MPMX19_01107	0.19	+1.2
1,140,948	-		MPMX19_01107	0.19	+0.2
1,140,992	+		MPMX19_01107	0.28	-1.1
1,140,992	+		MPMX19_01107	0.28	-1.2
1,140,992	+		MPMX19_01107	0.28	+0.2
1,140,992	+		MPMX19_01107	0.28	-0.3
1,140,992	+		MPMX19_01107	0.28	-1.5
1,140,992	+		MPMX19_01107	0.28	-0.1
1,140,992	+		MPMX19_01107	0.28	-0.1
1,140,992	+		MPMX19_01107	0.28	-1.6
1,140,992	+		MPMX19_01107	0.28	+0.1
1,140,992	+		MPMX19_01107	0.28	+1.0
1,140,992	+		MPMX19_01107	0.28	+0.5
1,140,992	+		MPMX19_01107	0.28	-0.0
1,140,992	+		MPMX19_01107	0.28	-0.5
1,140,992	+		MPMX19_01107	0.28	-0.3
1,140,992	+		MPMX19_01107	0.28	-0.7
1,140,993	-		MPMX19_01107	0.28	+0.1
1,140,993	-		MPMX19_01107	0.28	+0.2
1,140,993	-		MPMX19_01107	0.28	-0.6
1,140,993	-		MPMX19_01107	0.28	-2.6
1,140,993	-		MPMX19_01107	0.28	+0.0
1,140,993	-		MPMX19_01107	0.28	-0.5
1,140,993	-		MPMX19_01107	0.28	-0.0
1,140,993	-		MPMX19_01107	0.28	-0.4
1,140,993	-		MPMX19_01107	0.28	+0.9
1,140,993	-		MPMX19_01107	0.28	+0.5
1,140,993	-		MPMX19_01107	0.28	-0.4
1,140,993	-		MPMX19_01107	0.28	+0.1
1,140,993	-		MPMX19_01107	0.28	+1.0
1,140,993	-		MPMX19_01107	0.28	+0.3
1,141,187	+		MPMX19_01107	0.67	+0.1
1,141,187	+		MPMX19_01107	0.67	-1.0
1,141,187	+		MPMX19_01107	0.67	+0.1
1,141,187	+		MPMX19_01107	0.67	-1.5
1,141,187	+		MPMX19_01107	0.67	-0.0
1,141,187	+		MPMX19_01107	0.67	+1.2
1,141,187	+		MPMX19_01107	0.67	-0.5
1,141,187	+		MPMX19_01107	0.67	+0.8
1,141,187	+		MPMX19_01107	0.67	-0.8
1,141,188	-		MPMX19_01107	0.67	-0.0
1,141,188	-		MPMX19_01107	0.67	-1.1
1,141,188	-		MPMX19_01107	0.67	+0.5
1,141,188	-		MPMX19_01107	0.67	-2.5
1,141,188	-		MPMX19_01107	0.67	-0.6
1,141,188	-		MPMX19_01107	0.67	+0.2
1,141,188	-		MPMX19_01107	0.67	+0.3
1,141,188	-		MPMX19_01107	0.67	+0.3
1,141,188	-		MPMX19_01107	0.67	-2.1
1,141,228	+		MPMX19_01107	0.75	+1.3
1,141,228	+		MPMX19_01107	0.75	-0.9
1,141,229	-		MPMX19_01107	0.75	+0.1
1,141,229	-		MPMX19_01107	0.75	+0.4
1,141,229	-		MPMX19_01107	0.75	-1.5
1,141,229	-		MPMX19_01107	0.75	-0.2
1,141,229	-		MPMX19_01107	0.75	-0.1
1,141,229	-		MPMX19_01107	0.75	+0.4
1,141,229	-		MPMX19_01107	0.75	-0.4
1,141,229	-		MPMX19_01107	0.75	+0.7
1,141,229	-		MPMX19_01107	0.75	+0.0
1,141,373	+				-0.4
1,141,373	+				-1.5
1,141,373	+				+1.7
1,141,374	-				-0.1
1,141,374	-				+0.1
1,141,391	+				-0.7
1,141,392	-				-1.6
1,141,392	-				-0.7
1,141,392	-				+0.2
1,142,536	-				+0.1
1,142,563	-				+0.7
1,142,563	-				+0.6
1,142,575	-				-0.1
1,142,575	-				-0.7
1,142,575	-				-0.9
1,142,575	-				+0.7
1,142,575	-				+0.5
1,142,575	-				-1.2
1,142,575	-				+0.7
1,142,575	-				-1.2
1,142,575	-				-1.4
1,142,575	-				+0.6
1,142,575	-				-0.7
1,142,580	-				+0.9
1,142,580	-				+0.2
1,142,580	-				+0.6
1,142,580	-				-2.7
1,142,580	-				-1.1
1,142,580	-				-0.5
1,142,580	-				-0.8
1,142,580	-				+0.5
1,142,580	-				+1.2
1,142,580	-				-0.1
1,142,580	-				+1.0
1,142,580	-				-0.7
1,142,580	-				+1.2
1,142,580	-				+1.5
1,142,580	-				+0.7
1,142,580	-				+1.3
1,142,580	-				+0.3
1,142,580	-				-0.9
1,142,580	-				+1.0
1,142,580	-				+0.1
1,142,580	-				+0.5
1,142,580	-				-1.0
1,142,585	-				-1.4
1,142,585	-				-0.0
1,142,585	-				-0.3
1,142,614	-				-0.2
1,142,757	+				+0.4
1,142,757	+				+0.3
1,142,758	-				+0.5
1,142,758	-				+0.5
1,142,798	+				-0.4
1,142,798	+				+0.3
1,142,798	+				+0.5
1,142,798	+				+0.6
1,142,798	+				-0.1
1,142,799	-				-2.1
1,143,035	+		MPMX19_01109	0.36	-0.7
1,143,035	+		MPMX19_01109	0.36	-2.1
1,143,035	+		MPMX19_01109	0.36	-1.1
1,143,035	+		MPMX19_01109	0.36	+0.5
1,143,035	+		MPMX19_01109	0.36	+0.9
1,143,035	+		MPMX19_01109	0.36	+0.9
1,143,035	+		MPMX19_01109	0.36	-1.9
1,143,036	-		MPMX19_01109	0.36	-0.2
1,143,036	-		MPMX19_01109	0.36	-0.9
1,143,036	-		MPMX19_01109	0.36	+0.2
1,143,101	-		MPMX19_01109	0.44	+1.0
1,143,101	-		MPMX19_01109	0.44	+0.0
1,143,101	-		MPMX19_01109	0.44	+1.1
1,143,152	+		MPMX19_01109	0.50	+1.5
1,143,152	+		MPMX19_01109	0.50	-0.2
1,143,152	+		MPMX19_01109	0.50	+1.2
1,143,152	+		MPMX19_01109	0.50	+0.7
1,143,152	+		MPMX19_01109	0.50	-0.2
1,143,152	+		MPMX19_01109	0.50	-1.1
1,143,152	+		MPMX19_01109	0.50	-0.1
1,143,152	+		MPMX19_01109	0.50	-0.5
1,143,152	+		MPMX19_01109	0.50	-0.4
1,143,152	+		MPMX19_01109	0.50	-0.1
1,143,152	+		MPMX19_01109	0.50	-2.1
1,143,152	+		MPMX19_01109	0.50	-0.8
1,143,153	-		MPMX19_01109	0.50	-0.1
1,143,153	-		MPMX19_01109	0.50	+1.0
1,143,153	-		MPMX19_01109	0.50	+1.2
1,143,153	-		MPMX19_01109	0.50	-1.0
1,143,153	-		MPMX19_01109	0.50	+0.0
1,143,153	-		MPMX19_01109	0.50	-0.9
1,143,153	-		MPMX19_01109	0.50	-1.2
1,143,153	-		MPMX19_01109	0.50	+2.0
1,143,153	-		MPMX19_01109	0.50	-0.0
1,143,153	-		MPMX19_01109	0.50	-0.5
1,143,153	-		MPMX19_01109	0.50	-1.5
1,143,153	-		MPMX19_01109	0.50	-1.9
1,143,153	-		MPMX19_01109	0.50	-2.0
1,143,153	-		MPMX19_01109	0.50	+1.3
1,143,153	-		MPMX19_01109	0.50	-2.0
1,143,153	-		MPMX19_01109	0.50	-0.9
1,143,153	-		MPMX19_01109	0.50	-0.8
1,143,153	-		MPMX19_01109	0.50	+0.5
1,143,153	-		MPMX19_01109	0.50	+1.5
1,143,153	-		MPMX19_01109	0.50	+0.5
1,143,153	-		MPMX19_01109	0.50	+0.1
1,143,177	+		MPMX19_01109	0.53	-0.9
1,143,178	-		MPMX19_01109	0.53	-0.8
1,143,347	+		MPMX19_01109	0.73	-0.1
1,143,348	-		MPMX19_01109	0.73	+1.3
1,143,348	-		MPMX19_01109	0.73	-1.4
1,143,348	-		MPMX19_01109	0.73	+0.1
1,143,348	-		MPMX19_01109	0.73	+0.9
1,143,348	-		MPMX19_01109	0.73	+0.9
1,143,348	-		MPMX19_01109	0.73	-0.8
1,143,348	-		MPMX19_01109	0.73	+0.1
1,143,382	+		MPMX19_01109	0.77	+0.3
1,143,382	+		MPMX19_01109	0.77	+0.6
1,143,382	+		MPMX19_01109	0.77	+0.3
1,143,382	+		MPMX19_01109	0.77	+1.8
1,143,382	+		MPMX19_01109	0.77	+1.1
1,143,382	+		MPMX19_01109	0.77	-1.5
1,143,382	+		MPMX19_01109	0.77	-1.0
1,143,382	+		MPMX19_01109	0.77	-2.0
1,143,382	+		MPMX19_01109	0.77	+0.8
1,143,382	+		MPMX19_01109	0.77	-0.4
1,143,382	+		MPMX19_01109	0.77	+0.1
1,143,382	+		MPMX19_01109	0.77	-0.7
1,143,382	+		MPMX19_01109	0.77	-0.4
1,143,382	+		MPMX19_01109	0.77	-0.7
1,143,382	+		MPMX19_01109	0.77	+0.6
1,143,382	+		MPMX19_01109	0.77	-0.3
1,143,382	+		MPMX19_01109	0.77	+0.0
1,143,382	+		MPMX19_01109	0.77	-1.7
1,143,383	-		MPMX19_01109	0.78	+0.2
1,143,383	-		MPMX19_01109	0.78	-0.5
1,143,383	-		MPMX19_01109	0.78	-0.6
1,143,383	-		MPMX19_01109	0.78	-0.4
1,143,383	-		MPMX19_01109	0.78	-0.8
1,143,383	-		MPMX19_01109	0.78	-0.1
1,143,383	-		MPMX19_01109	0.78	-2.1
1,143,383	-		MPMX19_01109	0.78	+0.5
1,143,383	-		MPMX19_01109	0.78	-0.9
1,143,383	-		MPMX19_01109	0.78	-0.5
1,143,383	-		MPMX19_01109	0.78	+0.4
1,143,383	-		MPMX19_01109	0.78	-0.9
1,143,383	-		MPMX19_01109	0.78	-0.1
1,143,383	-		MPMX19_01109	0.78	-0.7
1,143,383	-		MPMX19_01109	0.78	-1.6
1,143,383	-		MPMX19_01109	0.78	+1.1
1,143,383	-		MPMX19_01109	0.78	+1.5
1,143,383	-		MPMX19_01109	0.78	+0.2
1,143,491	+				+0.5
1,143,491	+				-0.9
1,143,491	+				-0.7
1,143,491	+				-0.5
1,143,491	+				+0.3
1,143,491	+				-0.7
1,143,491	+				+0.1
1,143,491	+				+0.5
1,143,492	-				+0.7
1,143,492	-				-2.1
1,143,492	-				-1.8
1,143,492	-				-0.1
1,143,492	-				-0.5
1,143,492	-				-0.4