Strain Fitness in Variovorax sp. SCN45 around GFF7264

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
10,568	+		GFF7263	0.77	-0.2
10,854	+				+0.2
10,985	+				+0.1
10,985	+				-0.1
11,031	+				+0.1
11,031	+				-0.6
11,063	-				+0.5
11,074	+				-1.3
11,265	-				-0.3
11,340	+				-0.8
11,340	+				+0.2
11,340	+				-0.5
11,453	+		GFF7264	0.15	-0.8
11,794	-		GFF7264	0.55	-0.3
11,794	-		GFF7264	0.55	-1.5
11,970	-		GFF7264	0.76	-1.1
12,126	+				+1.6
12,127	-				-0.6
12,303	+				-1.1
12,513	+		GFF7265	0.29	-0.4
12,514	-		GFF7265	0.29	+0.2
12,540	+		GFF7265	0.31	-0.1
12,540	+		GFF7265	0.31	-0.1
12,688	-		GFF7265	0.45	-0.8
12,837	+		GFF7265	0.58	+1.5
12,838	-		GFF7265	0.58	+0.4
12,943	-		GFF7265	0.67	-0.2