Strain Fitness in Variovorax sp. SCN45 around GFF7175

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
38,193	+		GFF7174	0.49	+0.3
38,334	+		GFF7174	0.76	+1.8
38,334	+		GFF7174	0.76	-0.4
38,335	-		GFF7174	0.76	+0.4
38,392	-		GFF7174	0.86	-0.1
38,427	+				+1.3
38,428	-				-0.4
38,443	+				-0.7
38,444	-				-0.7
38,511	+				-0.0
38,511	+				-0.5
38,511	+				-0.1
38,511	+				-1.2
38,511	+				-1.5
38,511	+				+0.1
39,387	+		GFF7175	0.88	-1.3
39,523	+				-2.1
39,524	+				-0.3
39,524	+				-0.7
39,525	-				-0.2
39,525	-				-0.5
39,525	-				-0.7
39,525	-				-0.4
39,525	-				-0.1
39,525	-				-0.4
39,525	-				+0.1
39,689	-				-1.0