Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF708 and GFF709 overlap by 1 nucleotides GFF709 and GFF710 are separated by 90 nucleotides
GFF708 - Oxidoreductase, GMC family, at 765,571 to 767,286
GFF708
GFF709 - ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose), at 767,286 to 768,446
GFF709
GFF710 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 768,537 to 769,481
GFF710
Position (kb) 767
768
769 Strain fitness (log2 ratio) -2
-1
0
1
2 at 766.298 kb on + strand, within GFF708 at 766.298 kb on + strand, within GFF708 at 766.298 kb on + strand, within GFF708 at 766.299 kb on - strand, within GFF708 at 766.299 kb on - strand, within GFF708 at 766.361 kb on + strand, within GFF708 at 766.362 kb on - strand, within GFF708 at 766.594 kb on + strand, within GFF708 at 766.594 kb on + strand, within GFF708 at 766.594 kb on + strand, within GFF708 at 766.594 kb on + strand, within GFF708 at 766.594 kb on + strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.595 kb on - strand, within GFF708 at 766.652 kb on + strand, within GFF708 at 766.745 kb on + strand, within GFF708 at 766.896 kb on - strand, within GFF708 at 766.896 kb on - strand, within GFF708 at 766.896 kb on - strand, within GFF708 at 766.953 kb on - strand, within GFF708 at 767.114 kb on + strand, within GFF708 at 767.115 kb on - strand at 767.268 kb on - strand at 767.268 kb on - strand at 767.268 kb on - strand at 767.287 kb on + strand at 767.347 kb on + strand at 767.348 kb on - strand at 767.377 kb on + strand at 767.377 kb on + strand at 767.377 kb on + strand at 767.377 kb on + strand at 767.377 kb on + strand at 767.378 kb on - strand at 767.491 kb on + strand, within GFF709 at 767.492 kb on - strand, within GFF709 at 767.548 kb on + strand, within GFF709 at 767.548 kb on + strand, within GFF709 at 767.549 kb on - strand, within GFF709 at 767.549 kb on - strand, within GFF709 at 767.549 kb on - strand, within GFF709 at 767.549 kb on - strand, within GFF709 at 767.582 kb on - strand, within GFF709 at 767.582 kb on - strand, within GFF709 at 767.677 kb on + strand, within GFF709 at 767.677 kb on + strand, within GFF709 at 767.678 kb on - strand, within GFF709 at 767.740 kb on + strand, within GFF709 at 767.888 kb on - strand, within GFF709 at 767.888 kb on - strand, within GFF709 at 768.101 kb on - strand, within GFF709 at 768.101 kb on - strand, within GFF709 at 768.211 kb on + strand, within GFF709 at 768.211 kb on + strand, within GFF709 at 768.211 kb on + strand, within GFF709 at 768.212 kb on - strand, within GFF709 at 768.229 kb on + strand, within GFF709 at 768.229 kb on + strand, within GFF709 at 768.229 kb on + strand, within GFF709 at 768.229 kb on + strand, within GFF709 at 768.230 kb on - strand, within GFF709 at 768.230 kb on - strand, within GFF709 at 768.230 kb on - strand, within GFF709 at 768.526 kb on + strand at 768.527 kb on - strand at 768.527 kb on - strand at 768.655 kb on + strand, within GFF710 at 768.656 kb on - strand, within GFF710 at 768.656 kb on - strand, within GFF710 at 768.754 kb on + strand, within GFF710 at 768.754 kb on + strand, within GFF710 at 768.755 kb on - strand, within GFF710 at 769.039 kb on + strand, within GFF710 at 769.060 kb on + strand, within GFF710 at 769.061 kb on - strand, within GFF710
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 766,298 + GFF708 0.42 -0.1 766,298 + GFF708 0.42 -0.4 766,298 + GFF708 0.42 +0.4 766,299 - GFF708 0.42 +0.1 766,299 - GFF708 0.42 +0.1 766,361 + GFF708 0.46 -0.4 766,362 - GFF708 0.46 -0.4 766,594 + GFF708 0.60 -0.2 766,594 + GFF708 0.60 +1.1 766,594 + GFF708 0.60 +1.6 766,594 + GFF708 0.60 -0.1 766,594 + GFF708 0.60 +0.4 766,595 - GFF708 0.60 -0.4 766,595 - GFF708 0.60 +0.1 766,595 - GFF708 0.60 +0.9 766,595 - GFF708 0.60 -0.3 766,595 - GFF708 0.60 -0.1 766,595 - GFF708 0.60 -1.3 766,595 - GFF708 0.60 +0.8 766,595 - GFF708 0.60 +0.1 766,595 - GFF708 0.60 +0.7 766,652 + GFF708 0.63 +0.5 766,745 + GFF708 0.68 +1.2 766,896 - GFF708 0.77 -0.4 766,896 - GFF708 0.77 +0.2 766,896 - GFF708 0.77 +1.6 766,953 - GFF708 0.81 -1.1 767,114 + GFF708 0.90 -0.8 767,115 - -0.6 767,268 - +0.6 767,268 - -0.6 767,268 - +0.3 767,287 + -0.1 767,347 + +0.1 767,348 - +0.4 767,377 + -0.2 767,377 + -0.5 767,377 + -0.3 767,377 + -0.2 767,377 + -1.1 767,378 - -0.2 767,491 + GFF709 0.18 -0.3 767,492 - GFF709 0.18 -0.2 767,548 + GFF709 0.23 -0.4 767,548 + GFF709 0.23 +2.2 767,549 - GFF709 0.23 +0.4 767,549 - GFF709 0.23 -0.6 767,549 - GFF709 0.23 -0.3 767,549 - GFF709 0.23 +0.9 767,582 - GFF709 0.25 +0.0 767,582 - GFF709 0.25 +0.2 767,677 + GFF709 0.34 +0.1 767,677 + GFF709 0.34 +0.8 767,678 - GFF709 0.34 -0.4 767,740 + GFF709 0.39 -0.8 767,888 - GFF709 0.52 +0.1 767,888 - GFF709 0.52 +0.3 768,101 - GFF709 0.70 -0.5 768,101 - GFF709 0.70 -0.4 768,211 + GFF709 0.80 +0.3 768,211 + GFF709 0.80 +0.4 768,211 + GFF709 0.80 +0.7 768,212 - GFF709 0.80 +0.5 768,229 + GFF709 0.81 -0.8 768,229 + GFF709 0.81 +0.6 768,229 + GFF709 0.81 +0.4 768,229 + GFF709 0.81 -1.8 768,230 - GFF709 0.81 -0.7 768,230 - GFF709 0.81 -0.3 768,230 - GFF709 0.81 -0.8 768,526 + -1.3 768,527 - -1.8 768,527 - -0.4 768,655 + GFF710 0.12 -0.9 768,656 - GFF710 0.13 -0.7 768,656 - GFF710 0.13 +1.2 768,754 + GFF710 0.23 -0.2 768,754 + GFF710 0.23 +0.0 768,755 - GFF710 0.23 -1.4 769,039 + GFF710 0.53 -0.4 769,060 + GFF710 0.55 +1.0 769,061 - GFF710 0.55 +0.6
Or see this region's nucleotide sequence