Strain Fitness in Variovorax sp. SCN45 around GFF6984

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
2,386	+		GFF6983	0.72	-1.7
2,386	+		GFF6983	0.72	-0.8
2,560	+		GFF6983	0.85	-0.6
2,560	+		GFF6983	0.85	+0.7
2,560	+		GFF6983	0.85	+0.0
2,561	-		GFF6983	0.85	-0.3
2,739	-				-0.6
2,762	+				+0.7
2,921	+		GFF6984	0.20	+0.1
2,922	-		GFF6984	0.20	-0.4
2,980	+		GFF6984	0.29	-0.5
3,022	+		GFF6984	0.35	-1.5
3,022	+		GFF6984	0.35	+0.5
3,023	-		GFF6984	0.35	+0.0
3,023	-		GFF6984	0.35	-0.8
3,131	+		GFF6984	0.51	-1.5
3,382	+		GFF6984	0.87	-1.1
3,410	+				+0.4
3,557	-				+0.3
3,557	-				+1.7
3,557	-				-0.7
3,634	-				-0.3
4,204	+		GFF6985	0.72	+0.1