Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6703 and GFF6704 are separated by 4 nucleotides GFF6704 and GFF6705 are separated by 343 nucleotides GFF6705 and GFF6706 are separated by 81 nucleotides GFF6706 and GFF6707 are separated by 0 nucleotides
GFF6703 - Lipoprotein-releasing system ATP-binding protein LolD, at 12,254 to 12,931
GFF6703
GFF6704 - no description, at 12,936 to 13,151
GFF6704
GFF6705 - hypothetical protein, at 13,495 to 14,268
GFF6705
GFF6706 - ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92), at 14,350 to 14,976
GFF6706
GFF6707 - RidA/YER057c/UK114 superfamily protein, at 14,977 to 15,366
GFF6707
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 13.022 kb on + strand, within GFF6704 at 13.023 kb on - strand, within GFF6704 at 13.023 kb on - strand, within GFF6704 at 13.120 kb on + strand, within GFF6704 at 13.120 kb on + strand, within GFF6704 at 13.276 kb on + strand at 13.276 kb on + strand at 13.276 kb on + strand at 13.276 kb on + strand at 13.277 kb on - strand at 13.277 kb on - strand at 13.277 kb on - strand at 13.277 kb on - strand at 13.277 kb on - strand at 13.277 kb on - strand at 13.520 kb on + strand at 13.520 kb on + strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.521 kb on - strand at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.693 kb on + strand, within GFF6705 at 13.694 kb on - strand, within GFF6705 at 13.694 kb on - strand, within GFF6705 at 13.728 kb on - strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.874 kb on + strand, within GFF6705 at 13.943 kb on - strand, within GFF6705 at 13.943 kb on - strand, within GFF6705 at 14.050 kb on - strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.153 kb on + strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.154 kb on - strand, within GFF6705 at 14.252 kb on + strand at 14.252 kb on + strand at 14.253 kb on - strand at 14.253 kb on - strand at 14.253 kb on - strand at 14.285 kb on - strand at 14.430 kb on + strand, within GFF6706 at 14.431 kb on + strand, within GFF6706 at 14.432 kb on - strand, within GFF6706 at 14.432 kb on - strand, within GFF6706 at 14.859 kb on + strand, within GFF6706 at 14.860 kb on - strand, within GFF6706 at 14.993 kb on + strand at 14.993 kb on + strand at 14.993 kb on + strand at 14.993 kb on + strand at 14.994 kb on - strand at 14.994 kb on - strand at 14.994 kb on - strand at 15.077 kb on + strand, within GFF6707 at 15.077 kb on + strand, within GFF6707 at 15.077 kb on + strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.078 kb on - strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.086 kb on + strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707 at 15.087 kb on - strand, within GFF6707
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 13,022 + GFF6704 0.40 -1.6 13,023 - GFF6704 0.40 +1.2 13,023 - GFF6704 0.40 +0.9 13,120 + GFF6704 0.85 +0.3 13,120 + GFF6704 0.85 -1.9 13,276 + -1.1 13,276 + -0.2 13,276 + -1.2 13,276 + +0.2 13,277 - -0.7 13,277 - -0.6 13,277 - +0.1 13,277 - -0.9 13,277 - -0.2 13,277 - +0.3 13,520 + +0.1 13,520 + +1.1 13,521 - -0.4 13,521 - -1.1 13,521 - -1.2 13,521 - -0.2 13,693 + GFF6705 0.26 -0.7 13,693 + GFF6705 0.26 -0.6 13,693 + GFF6705 0.26 -0.2 13,693 + GFF6705 0.26 -0.2 13,693 + GFF6705 0.26 +0.6 13,694 - GFF6705 0.26 +0.3 13,694 - GFF6705 0.26 -0.5 13,728 - GFF6705 0.30 +0.0 13,874 + GFF6705 0.49 +0.6 13,874 + GFF6705 0.49 +0.2 13,874 + GFF6705 0.49 +1.6 13,943 - GFF6705 0.58 -0.0 13,943 - GFF6705 0.58 +1.6 14,050 - GFF6705 0.72 -1.4 14,153 + GFF6705 0.85 +0.7 14,153 + GFF6705 0.85 +1.8 14,153 + GFF6705 0.85 +0.3 14,153 + GFF6705 0.85 +0.3 14,153 + GFF6705 0.85 +1.6 14,153 + GFF6705 0.85 -1.3 14,153 + GFF6705 0.85 -0.1 14,153 + GFF6705 0.85 +0.3 14,154 - GFF6705 0.85 -0.6 14,154 - GFF6705 0.85 -0.2 14,154 - GFF6705 0.85 +0.9 14,154 - GFF6705 0.85 -0.4 14,154 - GFF6705 0.85 +0.9 14,154 - GFF6705 0.85 +0.7 14,154 - GFF6705 0.85 -1.0 14,154 - GFF6705 0.85 +0.6 14,154 - GFF6705 0.85 -0.2 14,154 - GFF6705 0.85 +0.2 14,252 + +0.2 14,252 + -0.5 14,253 - +0.1 14,253 - -0.4 14,253 - +0.9 14,285 - +1.4 14,430 + GFF6706 0.13 -0.4 14,431 + GFF6706 0.13 +0.1 14,432 - GFF6706 0.13 +0.2 14,432 - GFF6706 0.13 -0.7 14,859 + GFF6706 0.81 -0.8 14,860 - GFF6706 0.81 +1.2 14,993 + +0.4 14,993 + +0.9 14,993 + -0.4 14,993 + -0.3 14,994 - -0.9 14,994 - -0.9 14,994 - -0.1 15,077 + GFF6707 0.26 +0.6 15,077 + GFF6707 0.26 -0.7 15,077 + GFF6707 0.26 -0.4 15,078 - GFF6707 0.26 -2.9 15,078 - GFF6707 0.26 +0.0 15,078 - GFF6707 0.26 +1.6 15,078 - GFF6707 0.26 +0.0 15,086 + GFF6707 0.28 -1.0 15,086 + GFF6707 0.28 -0.2 15,086 + GFF6707 0.28 -1.2 15,086 + GFF6707 0.28 -0.3 15,086 + GFF6707 0.28 +0.6 15,086 + GFF6707 0.28 -0.3 15,086 + GFF6707 0.28 +0.1 15,086 + GFF6707 0.28 +0.0 15,086 + GFF6707 0.28 -0.1 15,087 - GFF6707 0.28 -0.7 15,087 - GFF6707 0.28 -0.3 15,087 - GFF6707 0.28 -0.5 15,087 - GFF6707 0.28 +0.6 15,087 - GFF6707 0.28 -0.2 15,087 - GFF6707 0.28 +0.0 15,087 - GFF6707 0.28 -0.8 15,087 - GFF6707 0.28 -0.3 15,087 - GFF6707 0.28 +0.0 15,087 - GFF6707 0.28 -0.2 15,087 - GFF6707 0.28 -0.3 15,087 - GFF6707 0.28 +0.5 15,087 - GFF6707 0.28 -0.4 15,087 - GFF6707 0.28 -0.3 15,087 - GFF6707 0.28 -1.4
Or see this region's nucleotide sequence