Strain Fitness in Variovorax sp. SCN45 around GFF6385

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
56,450	-		GFF6383	0.78	-0.8
56,781	+		GFF6384	0.25	-0.3
56,781	+		GFF6384	0.25	+0.1
56,781	+		GFF6384	0.25	+0.5
57,027	+		GFF6384	0.63	+0.7
57,028	-		GFF6384	0.63	-1.2
57,028	-		GFF6384	0.63	+0.1
57,086	+		GFF6384	0.72	-0.9
57,086	+		GFF6384	0.72	-1.2
57,086	+		GFF6384	0.72	-0.7
57,342	-				+0.4
57,342	-				-0.7
57,393	-		GFF6385	0.12	-1.7
57,885	+		GFF6385	0.65	+0.1
57,885	+		GFF6385	0.65	+0.2
58,111	-				+0.7
58,367	+				-2.4
58,368	-				-0.7
58,420	+		GFF6386	0.13	-0.1
58,420	+		GFF6386	0.13	-1.2
58,719	-		GFF6386	0.31	+0.2
58,719	-		GFF6386	0.31	-0.0
58,866	-		GFF6386	0.40	-1.2