Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF612 and GFF613 are separated by 79 nucleotides GFF613 and GFF614 overlap by 4 nucleotides GFF614 and GFF615 are separated by 76 nucleotides
GFF612 - hypothetical protein, at 660,122 to 661,069
GFF612
GFF613 - hypothetical protein, at 661,149 to 662,114
GFF613
GFF614 - no description, at 662,111 to 662,281
GFF614
GFF615 - beta-glucosidase (EC 3.2.1.21), at 662,358 to 664,643
GFF615
Position (kb) 661
662
663 Strain fitness (log2 ratio) -2
-1
0
1 at 660.319 kb on + strand, within GFF612 at 660.324 kb on - strand, within GFF612 at 660.324 kb on - strand, within GFF612 at 660.413 kb on - strand, within GFF612 at 660.413 kb on - strand, within GFF612 at 660.417 kb on - strand, within GFF612 at 660.419 kb on + strand, within GFF612 at 660.437 kb on - strand, within GFF612 at 660.437 kb on - strand, within GFF612 at 660.605 kb on - strand, within GFF612 at 660.605 kb on - strand, within GFF612 at 660.705 kb on - strand, within GFF612 at 660.706 kb on + strand, within GFF612 at 660.706 kb on + strand, within GFF612 at 660.707 kb on - strand, within GFF612 at 661.210 kb on + strand at 661.210 kb on + strand at 661.210 kb on + strand at 661.210 kb on + strand at 661.210 kb on + strand at 661.211 kb on - strand at 661.211 kb on - strand at 661.211 kb on - strand at 661.211 kb on - strand at 661.351 kb on - strand, within GFF613 at 661.351 kb on - strand, within GFF613 at 661.351 kb on - strand, within GFF613 at 661.395 kb on + strand, within GFF613 at 661.396 kb on - strand, within GFF613 at 661.443 kb on + strand, within GFF613 at 661.443 kb on + strand, within GFF613 at 661.444 kb on - strand, within GFF613 at 661.444 kb on - strand, within GFF613 at 661.446 kb on + strand, within GFF613 at 661.446 kb on + strand, within GFF613 at 661.447 kb on - strand, within GFF613 at 661.548 kb on - strand, within GFF613 at 661.605 kb on + strand, within GFF613 at 662.090 kb on - strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.095 kb on + strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.096 kb on - strand at 662.296 kb on - strand at 662.350 kb on - strand at 663.039 kb on + strand, within GFF615 at 663.066 kb on + strand, within GFF615 at 663.109 kb on - strand, within GFF615
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 660,319 + GFF612 0.21 +0.2 660,324 - GFF612 0.21 -2.3 660,324 - GFF612 0.21 +0.6 660,413 - GFF612 0.31 +0.4 660,413 - GFF612 0.31 -1.1 660,417 - GFF612 0.31 +0.3 660,419 + GFF612 0.31 +0.1 660,437 - GFF612 0.33 -0.6 660,437 - GFF612 0.33 -0.6 660,605 - GFF612 0.51 +0.0 660,605 - GFF612 0.51 -0.5 660,705 - GFF612 0.61 +0.2 660,706 + GFF612 0.62 -0.8 660,706 + GFF612 0.62 -1.9 660,707 - GFF612 0.62 -0.1 661,210 + +0.5 661,210 + -0.8 661,210 + +1.2 661,210 + +0.6 661,210 + -0.8 661,211 - +0.6 661,211 - -0.6 661,211 - +0.7 661,211 - -0.9 661,351 - GFF613 0.21 -0.8 661,351 - GFF613 0.21 -1.8 661,351 - GFF613 0.21 -0.3 661,395 + GFF613 0.25 -1.0 661,396 - GFF613 0.26 -0.6 661,443 + GFF613 0.30 -0.4 661,443 + GFF613 0.30 +1.2 661,444 - GFF613 0.31 -0.9 661,444 - GFF613 0.31 -1.3 661,446 + GFF613 0.31 -0.6 661,446 + GFF613 0.31 +0.2 661,447 - GFF613 0.31 +0.4 661,548 - GFF613 0.41 -0.1 661,605 + GFF613 0.47 -0.8 662,090 - -0.2 662,095 + -0.7 662,095 + -0.2 662,095 + -0.4 662,095 + -1.1 662,095 + +0.0 662,095 + -0.4 662,095 + -0.5 662,095 + +0.4 662,096 - +1.2 662,096 - +1.1 662,096 - -1.3 662,096 - +1.6 662,096 - -0.3 662,096 - -2.1 662,096 - +0.7 662,096 - +0.7 662,096 - -0.5 662,096 - -0.4 662,096 - +0.2 662,096 - -0.5 662,296 - +1.5 662,350 - -0.8 663,039 + GFF615 0.30 -1.0 663,066 + GFF615 0.31 -1.4 663,109 - GFF615 0.33 -1.2
Or see this region's nucleotide sequence