Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF5733 and GFF5734 are separated by 101 nucleotides GFF5734 and GFF5735 are separated by 95 nucleotides
GFF5733 - Methyl-accepting chemotaxis sensor/transducer protein, at 104,983 to 106,617
GFF5733
GFF5734 - Methyl-accepting chemotaxis sensor/transducer protein, at 106,719 to 108,449
GFF5734
GFF5735 - Flagellar hook-associated protein FlgK, at 108,545 to 110,509
GFF5735
Position (kb) 106
107
108
109 Strain fitness (log2 ratio) -2
-1
0
1 at 107.062 kb on - strand, within GFF5734 at 107.062 kb on - strand, within GFF5734 at 107.223 kb on + strand, within GFF5734 at 108.502 kb on + strand at 108.536 kb on + strand at 108.536 kb on + strand at 108.537 kb on - strand at 108.544 kb on + strand at 108.545 kb on - strand at 108.545 kb on - strand at 108.564 kb on - strand at 108.564 kb on - strand at 108.636 kb on - strand at 108.747 kb on - strand, within GFF5735 at 108.747 kb on - strand, within GFF5735 at 108.747 kb on - strand, within GFF5735 at 108.747 kb on - strand, within GFF5735 at 108.755 kb on + strand, within GFF5735 at 108.756 kb on - strand, within GFF5735 at 108.995 kb on + strand, within GFF5735 at 108.996 kb on - strand, within GFF5735 at 109.061 kb on + strand, within GFF5735 at 109.061 kb on + strand, within GFF5735 at 109.220 kb on + strand, within GFF5735 at 109.221 kb on - strand, within GFF5735 at 109.221 kb on - strand, within GFF5735 at 109.221 kb on - strand, within GFF5735 at 109.221 kb on - strand, within GFF5735 at 109.266 kb on - strand, within GFF5735 at 109.266 kb on - strand, within GFF5735
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 107,062 - GFF5734 0.20 -2.1 107,062 - GFF5734 0.20 -0.4 107,223 + GFF5734 0.29 -1.4 108,502 + -0.4 108,536 + +0.0 108,536 + -0.3 108,537 - +0.9 108,544 + -0.5 108,545 - -0.6 108,545 - -0.1 108,564 - -0.0 108,564 - -0.9 108,636 - -0.1 108,747 - GFF5735 0.10 -0.1 108,747 - GFF5735 0.10 -0.4 108,747 - GFF5735 0.10 -0.3 108,747 - GFF5735 0.10 -1.0 108,755 + GFF5735 0.11 -0.9 108,756 - GFF5735 0.11 -1.4 108,995 + GFF5735 0.23 -0.1 108,996 - GFF5735 0.23 +0.0 109,061 + GFF5735 0.26 -1.4 109,061 + GFF5735 0.26 +0.4 109,220 + GFF5735 0.34 -0.3 109,221 - GFF5735 0.34 +0.3 109,221 - GFF5735 0.34 -0.9 109,221 - GFF5735 0.34 +0.6 109,221 - GFF5735 0.34 -1.2 109,266 - GFF5735 0.37 +0.4 109,266 - GFF5735 0.37 -0.4
Or see this region's nucleotide sequence