Strain Fitness in Variovorax sp. SCN45 around GFF4191

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
105,473	+		GFF4190	0.31	-0.4
105,764	+		GFF4190	0.71	-0.0
105,765	-		GFF4190	0.71	-0.3
105,765	-		GFF4190	0.71	+0.3
105,795	+		GFF4190	0.75	+0.3
105,846	-		GFF4190	0.82	+0.4
105,848	+		GFF4190	0.83	+0.0
105,848	+		GFF4190	0.83	-1.2
105,849	-		GFF4190	0.83	+0.1
106,047	+				-0.3
106,216	-		GFF4191	0.13	+0.6
106,386	+		GFF4191	0.31	-1.0
106,387	-		GFF4191	0.31	-0.9
106,444	-		GFF4191	0.37	+1.6
106,510	-		GFF4191	0.44	-1.2
106,621	+		GFF4191	0.55	+0.3
106,621	+		GFF4191	0.55	-0.3
106,621	+		GFF4191	0.55	-1.3
106,622	-		GFF4191	0.55	-1.0
106,803	+		GFF4191	0.74	-0.3
106,803	+		GFF4191	0.74	-0.1
106,980	+				-0.1
107,688	+		GFF4192	0.84	-0.5
107,761	-				-0.0
107,797	-				+0.0
107,885	-				+0.6