Strain Fitness in Variovorax sp. SCN45 around GFF4102

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
2,714	+		GFF4101	0.48	+1.2
2,715	-		GFF4101	0.48	-1.8
2,715	-		GFF4101	0.48	-0.3
3,024	-		GFF4101	0.66	-0.0
3,055	+		GFF4101	0.68	+0.1
3,144	-		GFF4101	0.73	-0.6
4,428	-		GFF4102	0.48	-0.7
4,645	+		GFF4102	0.61	+0.2
4,646	-		GFF4102	0.61	-2.2
4,646	-		GFF4102	0.61	-0.6
4,646	-		GFF4102	0.61	-0.8
5,666	+		GFF4103	0.10	-0.5
5,820	-		GFF4103	0.18	+1.4
6,072	-		GFF4103	0.29	-0.0