Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2581 and GFF2582 are separated by 78 nucleotides GFF2582 and GFF2583 are separated by 69 nucleotides GFF2583 and GFF2584 are separated by 16 nucleotides GFF2584 and GFF2585 overlap by 16 nucleotides GFF2585 and GFF2586 are separated by 48 nucleotides
GFF2581 - Segregation and condensation protein A, at 638,123 to 638,959
GFF2581
GFF2582 - Uncharacterized DUF3460-containg protein Bmul_0854, at 639,038 to 639,244
GFF2582
GFF2583 - putative lipoprotein, at 639,314 to 639,790
GFF2583
GFF2584 - Sulfate permease, at 639,807 to 641,486
GFF2584
GFF2585 - no description, at 641,471 to 641,584
GFF2585
GFF2586 - Hydrogenase assembly protein HoxX, at 641,633 to 643,354
GFF2586
Position (kb) 639
640
641
642 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 638.982 kb on + strand at 639.040 kb on - strand at 639.040 kb on - strand at 639.040 kb on - strand at 639.040 kb on - strand at 639.040 kb on - strand at 639.058 kb on - strand at 639.058 kb on - strand at 639.063 kb on + strand, within GFF2582 at 639.063 kb on + strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.064 kb on - strand, within GFF2582 at 639.093 kb on + strand, within GFF2582 at 639.093 kb on + strand, within GFF2582 at 639.094 kb on - strand, within GFF2582 at 639.094 kb on - strand, within GFF2582 at 639.094 kb on - strand, within GFF2582 at 639.219 kb on + strand, within GFF2582 at 639.219 kb on + strand, within GFF2582 at 639.219 kb on + strand, within GFF2582 at 639.219 kb on + strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.220 kb on - strand, within GFF2582 at 639.244 kb on + strand at 639.244 kb on + strand at 639.244 kb on + strand at 639.244 kb on + strand at 639.244 kb on + strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.245 kb on - strand at 639.257 kb on + strand at 639.258 kb on - strand at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.476 kb on + strand, within GFF2583 at 639.477 kb on - strand, within GFF2583 at 639.477 kb on - strand, within GFF2583 at 639.477 kb on - strand, within GFF2583 at 639.477 kb on - strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.506 kb on + strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.507 kb on - strand, within GFF2583 at 639.648 kb on - strand, within GFF2583 at 639.648 kb on - strand, within GFF2583 at 639.648 kb on - strand, within GFF2583 at 639.775 kb on + strand at 639.979 kb on + strand, within GFF2584 at 639.979 kb on + strand, within GFF2584 at 639.979 kb on + strand, within GFF2584 at 639.979 kb on + strand, within GFF2584 at 639.979 kb on + strand, within GFF2584 at 639.980 kb on - strand, within GFF2584 at 639.980 kb on - strand, within GFF2584 at 639.980 kb on - strand, within GFF2584 at 640.087 kb on + strand, within GFF2584 at 640.087 kb on + strand, within GFF2584 at 640.087 kb on + strand, within GFF2584 at 640.088 kb on - strand, within GFF2584 at 640.088 kb on - strand, within GFF2584 at 640.088 kb on - strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.096 kb on + strand, within GFF2584 at 640.097 kb on - strand, within GFF2584 at 640.097 kb on - strand, within GFF2584 at 640.097 kb on - strand, within GFF2584 at 640.183 kb on - strand, within GFF2584 at 640.184 kb on + strand, within GFF2584 at 641.425 kb on + strand at 641.425 kb on + strand at 641.426 kb on - strand at 641.426 kb on - strand at 641.426 kb on - strand at 641.426 kb on - strand at 641.543 kb on + strand, within GFF2585 at 641.543 kb on + strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.544 kb on - strand, within GFF2585 at 641.558 kb on + strand, within GFF2585 at 641.580 kb on + strand at 641.581 kb on - strand at 641.581 kb on - strand at 641.605 kb on + strand at 641.605 kb on + strand at 641.606 kb on - strand at 641.606 kb on - strand at 641.618 kb on + strand at 641.618 kb on + strand at 641.618 kb on + strand at 641.619 kb on - strand at 641.619 kb on - strand at 642.026 kb on + strand, within GFF2586 at 642.098 kb on + strand, within GFF2586 at 642.098 kb on + strand, within GFF2586 at 642.098 kb on + strand, within GFF2586 at 642.098 kb on + strand, within GFF2586 at 642.098 kb on + strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.099 kb on - strand, within GFF2586 at 642.272 kb on + strand, within GFF2586 at 642.272 kb on + strand, within GFF2586 at 642.272 kb on + strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.273 kb on - strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.428 kb on + strand, within GFF2586 at 642.429 kb on - strand, within GFF2586 at 642.429 kb on - strand, within GFF2586 at 642.429 kb on - strand, within GFF2586 at 642.429 kb on - strand, within GFF2586
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 638,982 + -0.0 639,040 - +0.8 639,040 - -0.9 639,040 - -1.1 639,040 - -0.3 639,040 - -0.3 639,058 - -0.9 639,058 - -0.5 639,063 + GFF2582 0.12 +0.7 639,063 + GFF2582 0.12 -1.3 639,064 - GFF2582 0.13 -0.5 639,064 - GFF2582 0.13 -0.3 639,064 - GFF2582 0.13 -2.2 639,064 - GFF2582 0.13 +0.1 639,064 - GFF2582 0.13 -0.2 639,064 - GFF2582 0.13 -0.1 639,064 - GFF2582 0.13 -0.7 639,064 - GFF2582 0.13 +0.2 639,093 + GFF2582 0.27 -0.0 639,093 + GFF2582 0.27 -0.9 639,094 - GFF2582 0.27 -0.6 639,094 - GFF2582 0.27 +0.7 639,094 - GFF2582 0.27 +0.8 639,219 + GFF2582 0.87 +1.7 639,219 + GFF2582 0.87 +1.7 639,219 + GFF2582 0.87 -0.3 639,219 + GFF2582 0.87 -0.7 639,220 - GFF2582 0.88 -0.1 639,220 - GFF2582 0.88 +0.8 639,220 - GFF2582 0.88 -2.8 639,220 - GFF2582 0.88 +0.3 639,220 - GFF2582 0.88 +0.5 639,220 - GFF2582 0.88 -0.1 639,220 - GFF2582 0.88 -0.2 639,220 - GFF2582 0.88 +0.1 639,244 + -1.2 639,244 + -1.2 639,244 + +1.1 639,244 + -0.8 639,244 + -2.2 639,245 - +0.1 639,245 - -0.3 639,245 - -0.9 639,245 - +0.1 639,245 - -0.6 639,245 - -0.2 639,245 - -0.1 639,245 - -2.2 639,245 - -1.3 639,245 - -0.7 639,245 - -1.1 639,245 - -0.4 639,245 - -0.3 639,245 - +0.1 639,257 + -1.5 639,258 - -1.2 639,476 + GFF2583 0.34 +0.7 639,476 + GFF2583 0.34 -0.4 639,476 + GFF2583 0.34 -0.1 639,476 + GFF2583 0.34 +0.1 639,476 + GFF2583 0.34 +0.7 639,476 + GFF2583 0.34 +0.3 639,476 + GFF2583 0.34 -1.3 639,476 + GFF2583 0.34 -1.0 639,476 + GFF2583 0.34 +0.1 639,477 - GFF2583 0.34 +0.6 639,477 - GFF2583 0.34 -0.5 639,477 - GFF2583 0.34 +1.7 639,477 - GFF2583 0.34 -0.1 639,506 + GFF2583 0.40 -0.1 639,506 + GFF2583 0.40 +0.0 639,506 + GFF2583 0.40 +0.1 639,506 + GFF2583 0.40 +0.0 639,506 + GFF2583 0.40 -0.2 639,506 + GFF2583 0.40 -0.8 639,506 + GFF2583 0.40 +0.4 639,506 + GFF2583 0.40 -0.7 639,506 + GFF2583 0.40 +0.0 639,506 + GFF2583 0.40 +0.1 639,506 + GFF2583 0.40 -0.3 639,506 + GFF2583 0.40 -0.3 639,506 + GFF2583 0.40 +0.3 639,506 + GFF2583 0.40 +0.2 639,506 + GFF2583 0.40 +0.2 639,506 + GFF2583 0.40 -0.1 639,506 + GFF2583 0.40 +0.7 639,506 + GFF2583 0.40 -0.3 639,506 + GFF2583 0.40 +0.1 639,506 + GFF2583 0.40 +0.2 639,507 - GFF2583 0.40 -0.1 639,507 - GFF2583 0.40 +0.1 639,507 - GFF2583 0.40 +0.4 639,507 - GFF2583 0.40 -0.1 639,507 - GFF2583 0.40 +0.5 639,507 - GFF2583 0.40 -1.1 639,507 - GFF2583 0.40 +1.7 639,507 - GFF2583 0.40 -0.6 639,507 - GFF2583 0.40 +1.3 639,507 - GFF2583 0.40 -0.4 639,507 - GFF2583 0.40 +0.5 639,507 - GFF2583 0.40 -0.7 639,507 - GFF2583 0.40 -1.0 639,507 - GFF2583 0.40 -0.5 639,507 - GFF2583 0.40 -1.1 639,507 - GFF2583 0.40 -1.5 639,507 - GFF2583 0.40 +0.5 639,507 - GFF2583 0.40 +1.3 639,507 - GFF2583 0.40 +0.0 639,507 - GFF2583 0.40 +1.0 639,648 - GFF2583 0.70 +1.0 639,648 - GFF2583 0.70 +1.3 639,648 - GFF2583 0.70 -0.2 639,775 + +0.4 639,979 + GFF2584 0.10 +0.7 639,979 + GFF2584 0.10 -2.8 639,979 + GFF2584 0.10 +0.1 639,979 + GFF2584 0.10 +0.0 639,979 + GFF2584 0.10 +0.2 639,980 - GFF2584 0.10 -1.2 639,980 - GFF2584 0.10 -0.7 639,980 - GFF2584 0.10 -0.5 640,087 + GFF2584 0.17 +0.7 640,087 + GFF2584 0.17 +0.1 640,087 + GFF2584 0.17 -0.7 640,088 - GFF2584 0.17 +0.5 640,088 - GFF2584 0.17 +0.4 640,088 - GFF2584 0.17 -0.0 640,096 + GFF2584 0.17 -0.2 640,096 + GFF2584 0.17 -1.0 640,096 + GFF2584 0.17 -0.1 640,096 + GFF2584 0.17 -0.3 640,096 + GFF2584 0.17 +0.3 640,096 + GFF2584 0.17 -0.5 640,096 + GFF2584 0.17 -1.8 640,096 + GFF2584 0.17 -0.4 640,096 + GFF2584 0.17 -0.7 640,097 - GFF2584 0.17 +0.3 640,097 - GFF2584 0.17 -0.9 640,097 - GFF2584 0.17 -0.2 640,183 - GFF2584 0.22 -1.2 640,184 + GFF2584 0.22 -0.4 641,425 + +0.3 641,425 + +0.8 641,426 - +0.2 641,426 - +1.0 641,426 - +0.2 641,426 - -0.3 641,543 + GFF2585 0.63 +0.0 641,543 + GFF2585 0.63 +1.3 641,544 - GFF2585 0.64 -0.1 641,544 - GFF2585 0.64 +0.7 641,544 - GFF2585 0.64 -0.1 641,544 - GFF2585 0.64 +0.3 641,544 - GFF2585 0.64 +1.2 641,544 - GFF2585 0.64 +0.8 641,558 + GFF2585 0.76 -1.1 641,580 + -0.8 641,581 - -0.2 641,581 - +0.9 641,605 + -0.5 641,605 + +0.1 641,606 - +1.1 641,606 - -0.1 641,618 + -0.9 641,618 + -0.7 641,618 + +0.1 641,619 - +0.2 641,619 - -0.7 642,026 + GFF2586 0.23 -0.1 642,098 + GFF2586 0.27 -0.8 642,098 + GFF2586 0.27 -0.1 642,098 + GFF2586 0.27 +0.2 642,098 + GFF2586 0.27 -0.1 642,098 + GFF2586 0.27 +0.5 642,099 - GFF2586 0.27 -0.0 642,099 - GFF2586 0.27 -0.9 642,099 - GFF2586 0.27 -0.7 642,099 - GFF2586 0.27 -0.7 642,099 - GFF2586 0.27 -0.4 642,099 - GFF2586 0.27 -1.0 642,099 - GFF2586 0.27 -0.2 642,272 + GFF2586 0.37 -0.4 642,272 + GFF2586 0.37 -1.0 642,272 + GFF2586 0.37 -1.6 642,273 - GFF2586 0.37 +0.5 642,273 - GFF2586 0.37 -0.4 642,273 - GFF2586 0.37 -0.1 642,273 - GFF2586 0.37 -0.2 642,273 - GFF2586 0.37 -1.0 642,273 - GFF2586 0.37 +2.5 642,273 - GFF2586 0.37 -0.8 642,273 - GFF2586 0.37 -0.1 642,273 - GFF2586 0.37 +0.7 642,428 + GFF2586 0.46 -0.0 642,428 + GFF2586 0.46 -0.1 642,428 + GFF2586 0.46 -0.1 642,428 + GFF2586 0.46 -1.3 642,428 + GFF2586 0.46 +1.7 642,428 + GFF2586 0.46 +0.1 642,429 - GFF2586 0.46 -0.4 642,429 - GFF2586 0.46 +0.5 642,429 - GFF2586 0.46 +0.0 642,429 - GFF2586 0.46 -1.4
Or see this region's nucleotide sequence