Strain Fitness in Variovorax sp. SCN45 around GFF2463

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
522,434	-		GFF2462	0.70	+0.0
522,648	+		GFF2462	0.78	+0.3
522,648	+		GFF2462	0.78	+0.9
522,649	-		GFF2462	0.78	+1.3
522,649	-		GFF2462	0.78	-0.2
522,766	-		GFF2462	0.82	-0.3
523,162	-				-0.7
523,195	-				+0.3
523,227	+				-0.6
523,681	+		GFF2463	0.58	-1.5
523,682	-		GFF2463	0.58	-0.7
523,915	+				-0.2
523,916	-				-0.0
524,272	-		GFF2464	0.17	-0.3