Strain Fitness in Variovorax sp. SCN45 around GFF2427

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
477,428	+		GFF2426	0.40	-1.4
477,639	-		GFF2426	0.60	-0.2
477,674	+		GFF2426	0.64	-0.1
477,675	-		GFF2426	0.64	+0.1
477,794	+		GFF2426	0.75	-0.6
478,133	-				-0.3
478,275	+		GFF2427	0.10	-1.2
478,451	+		GFF2427	0.38	+0.0
478,451	+		GFF2427	0.38	-0.2
478,452	-		GFF2427	0.39	-0.4
478,452	-		GFF2427	0.39	-1.9
478,873	+				-0.9
478,874	-				-0.1
478,874	-				-0.8
479,818	+				-0.5
479,819	-				-0.5