Strain Fitness in Variovorax sp. SCN45 around GFF2365

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
418,332	+		GFF2364	0.76	+0.3
418,332	+		GFF2364	0.76	-0.1
418,333	-		GFF2364	0.76	-0.1
418,921	+		GFF2365	0.13	-0.6
418,921	+		GFF2365	0.13	-0.2
419,091	+		GFF2365	0.24	-0.1
419,091	+		GFF2365	0.24	+1.7
419,097	+		GFF2365	0.25	-1.1
419,097	+		GFF2365	0.25	-0.8
419,097	+		GFF2365	0.25	-0.1
419,097	+		GFF2365	0.25	-0.6
419,098	-		GFF2365	0.25	-1.5
419,682	+		GFF2365	0.63	-0.1
419,682	+		GFF2365	0.63	+0.8
419,683	-		GFF2365	0.63	-1.0
419,943	+		GFF2365	0.80	-1.2
419,943	+		GFF2365	0.80	-0.1
419,944	-		GFF2365	0.80	-0.1
419,986	-		GFF2365	0.83	+0.9
419,986	-		GFF2365	0.83	-0.7
420,021	+		GFF2365	0.85	+0.5
420,021	+		GFF2365	0.85	+0.2
420,021	+		GFF2365	0.85	+0.5
420,070	-		GFF2365	0.89	-0.6
420,070	-		GFF2365	0.89	+0.2
420,330	+				-0.8
420,355	-				-0.3
420,372	+		GFF2366	0.10	+2.7
420,372	+		GFF2366	0.10	+0.1
420,372	+		GFF2366	0.10	+0.0
420,373	-		GFF2366	0.10	-0.6
420,373	-		GFF2366	0.10	+0.4
420,542	-		GFF2366	0.27	-0.5
420,697	-		GFF2366	0.43	+0.7
420,697	-		GFF2366	0.43	-1.7
420,784	-		GFF2366	0.52	+0.1
420,784	-		GFF2366	0.52	-1.0
420,897	+		GFF2366	0.63	+0.1
420,965	+		GFF2366	0.70	-0.5
420,965	+		GFF2366	0.70	-0.1
420,966	-		GFF2366	0.70	-0.8
420,966	-		GFF2366	0.70	-0.1
420,981	+		GFF2366	0.71	-1.8
420,981	+		GFF2366	0.71	+0.7
421,164	+		GFF2366	0.90	-0.1