Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1804 and GFF1805 are separated by 73 nucleotides GFF1805 and GFF1806 are separated by 5 nucleotides GFF1806 and GFF1807 are separated by 51 nucleotides
GFF1804 - Uncharacterized UPF0118 membrane protein, at 467,462 to 468,580
GFF1804
GFF1805 - Transcriptional regulator, GntR family, at 468,654 to 469,358
GFF1805
GFF1806 - Na+/H+-dicarboxylate symporter, at 469,364 to 470,707
GFF1806
GFF1807 - no description, at 470,759 to 470,875
GFF1807
Position (kb) 469
470
471 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.580 kb on + strand at 468.581 kb on - strand at 468.581 kb on - strand at 468.581 kb on - strand at 468.581 kb on - strand at 468.581 kb on - strand at 468.581 kb on - strand at 468.596 kb on + strand at 468.596 kb on + strand at 468.596 kb on + strand at 468.872 kb on - strand, within GFF1805 at 469.159 kb on + strand, within GFF1805 at 469.159 kb on + strand, within GFF1805 at 469.159 kb on + strand, within GFF1805 at 469.160 kb on - strand, within GFF1805 at 469.160 kb on - strand, within GFF1805 at 469.397 kb on + strand at 469.398 kb on - strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.449 kb on + strand at 469.450 kb on - strand at 469.450 kb on - strand at 469.450 kb on - strand at 469.450 kb on - strand at 469.761 kb on - strand, within GFF1806 at 469.761 kb on - strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.779 kb on + strand, within GFF1806 at 469.780 kb on - strand, within GFF1806 at 469.780 kb on - strand, within GFF1806 at 469.809 kb on + strand, within GFF1806 at 469.809 kb on + strand, within GFF1806 at 469.938 kb on + strand, within GFF1806 at 469.938 kb on + strand, within GFF1806 at 469.938 kb on + strand, within GFF1806 at 469.938 kb on + strand, within GFF1806 at 469.939 kb on - strand, within GFF1806 at 469.939 kb on - strand, within GFF1806 at 469.939 kb on - strand, within GFF1806 at 470.022 kb on + strand, within GFF1806 at 470.022 kb on + strand, within GFF1806 at 470.022 kb on + strand, within GFF1806 at 470.022 kb on + strand, within GFF1806 at 470.023 kb on - strand, within GFF1806 at 470.070 kb on + strand, within GFF1806 at 470.070 kb on + strand, within GFF1806 at 470.071 kb on - strand, within GFF1806 at 470.071 kb on - strand, within GFF1806 at 470.352 kb on + strand, within GFF1806 at 470.352 kb on + strand, within GFF1806 at 470.352 kb on + strand, within GFF1806 at 470.352 kb on + strand, within GFF1806 at 470.352 kb on + strand, within GFF1806 at 470.353 kb on - strand, within GFF1806 at 470.353 kb on - strand, within GFF1806 at 470.353 kb on - strand, within GFF1806 at 470.353 kb on - strand, within GFF1806 at 470.472 kb on + strand, within GFF1806 at 470.472 kb on + strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.473 kb on - strand, within GFF1806 at 470.623 kb on - strand at 470.623 kb on - strand at 470.775 kb on + strand, within GFF1807 at 470.808 kb on - strand, within GFF1807 at 470.873 kb on + strand at 470.873 kb on + strand at 470.873 kb on + strand at 470.873 kb on + strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.874 kb on - strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.898 kb on + strand at 470.899 kb on - strand at 470.899 kb on - strand at 470.899 kb on - strand at 470.899 kb on - strand at 470.899 kb on - strand at 470.899 kb on - strand at 470.972 kb on + strand at 470.972 kb on + strand at 470.972 kb on + strand at 470.972 kb on + strand at 470.972 kb on + strand at 470.973 kb on - strand at 470.973 kb on - strand at 470.988 kb on + strand at 470.988 kb on + strand at 470.989 kb on - strand at 471.105 kb on + strand at 471.105 kb on + strand at 471.106 kb on - strand at 471.107 kb on + strand at 471.107 kb on + strand at 471.108 kb on - strand at 471.108 kb on - strand at 471.149 kb on - strand at 471.149 kb on - strand at 471.157 kb on + strand at 471.157 kb on + strand at 471.158 kb on - strand at 471.158 kb on - strand at 471.158 kb on - strand at 471.158 kb on - strand at 471.158 kb on - strand at 471.158 kb on - strand at 471.163 kb on + strand at 471.164 kb on - strand at 471.164 kb on - strand at 471.267 kb on + strand at 471.267 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.319 kb on + strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.320 kb on - strand at 471.435 kb on + strand at 471.435 kb on + strand at 471.436 kb on - strand at 471.436 kb on - strand at 471.436 kb on - strand at 471.495 kb on + strand at 471.495 kb on + strand at 471.495 kb on + strand at 471.495 kb on + strand at 471.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 468,580 + +3.2 468,580 + +0.3 468,580 + -0.3 468,580 + -0.1 468,580 + -1.8 468,580 + -0.4 468,580 + -0.3 468,580 + -0.3 468,581 - -1.1 468,581 - -0.8 468,581 - -1.1 468,581 - -0.9 468,581 - -0.3 468,581 - +0.2 468,596 + -1.2 468,596 + -0.7 468,596 + -0.4 468,872 - GFF1805 0.31 -0.9 469,159 + GFF1805 0.72 -0.0 469,159 + GFF1805 0.72 -0.3 469,159 + GFF1805 0.72 -0.7 469,160 - GFF1805 0.72 -0.9 469,160 - GFF1805 0.72 +1.7 469,397 + +0.4 469,398 - +0.0 469,449 + -0.6 469,449 + +0.4 469,449 + +0.3 469,449 + +1.2 469,449 + -1.0 469,449 + +1.7 469,449 + +0.1 469,450 - -0.1 469,450 - -1.1 469,450 - -0.5 469,450 - -0.4 469,761 - GFF1806 0.30 -2.8 469,761 - GFF1806 0.30 -1.0 469,779 + GFF1806 0.31 -0.6 469,779 + GFF1806 0.31 -1.7 469,779 + GFF1806 0.31 -0.7 469,779 + GFF1806 0.31 -0.6 469,779 + GFF1806 0.31 +0.3 469,779 + GFF1806 0.31 +0.7 469,779 + GFF1806 0.31 -0.0 469,780 - GFF1806 0.31 +0.8 469,780 - GFF1806 0.31 +0.8 469,809 + GFF1806 0.33 -0.8 469,809 + GFF1806 0.33 -0.2 469,938 + GFF1806 0.43 -0.5 469,938 + GFF1806 0.43 -0.1 469,938 + GFF1806 0.43 -0.1 469,938 + GFF1806 0.43 +0.1 469,939 - GFF1806 0.43 -0.3 469,939 - GFF1806 0.43 +1.0 469,939 - GFF1806 0.43 +1.2 470,022 + GFF1806 0.49 +0.8 470,022 + GFF1806 0.49 -0.7 470,022 + GFF1806 0.49 -0.8 470,022 + GFF1806 0.49 -0.6 470,023 - GFF1806 0.49 -0.8 470,070 + GFF1806 0.53 +0.2 470,070 + GFF1806 0.53 -1.4 470,071 - GFF1806 0.53 +0.3 470,071 - GFF1806 0.53 -0.0 470,352 + GFF1806 0.74 +2.1 470,352 + GFF1806 0.74 -0.0 470,352 + GFF1806 0.74 +0.1 470,352 + GFF1806 0.74 +0.2 470,352 + GFF1806 0.74 +0.9 470,353 - GFF1806 0.74 -0.4 470,353 - GFF1806 0.74 -0.9 470,353 - GFF1806 0.74 +0.2 470,353 - GFF1806 0.74 -0.9 470,472 + GFF1806 0.82 +0.6 470,472 + GFF1806 0.82 +0.1 470,473 - GFF1806 0.83 -2.0 470,473 - GFF1806 0.83 +1.1 470,473 - GFF1806 0.83 +1.3 470,473 - GFF1806 0.83 +0.3 470,473 - GFF1806 0.83 -0.5 470,473 - GFF1806 0.83 -0.8 470,473 - GFF1806 0.83 +0.1 470,623 - -0.7 470,623 - +0.1 470,775 + GFF1807 0.14 +1.5 470,808 - GFF1807 0.42 +1.4 470,873 + -0.1 470,873 + -0.6 470,873 + -0.2 470,873 + +0.4 470,874 - +0.3 470,874 - -1.7 470,874 - -1.9 470,874 - +0.3 470,874 - +1.1 470,874 - +0.3 470,874 - -1.3 470,898 + -0.1 470,898 + -0.2 470,898 + -0.1 470,898 + +0.4 470,898 + -0.3 470,898 + +0.1 470,898 + -0.9 470,898 + -0.4 470,899 - +0.9 470,899 - -0.1 470,899 - +0.5 470,899 - -0.1 470,899 - -0.6 470,899 - -0.3 470,972 + -1.3 470,972 + -0.3 470,972 + -0.1 470,972 + +1.1 470,972 + +0.2 470,973 - -0.6 470,973 - -0.7 470,988 + -0.1 470,988 + -1.0 470,989 - -0.6 471,105 + -0.9 471,105 + +0.2 471,106 - -0.2 471,107 + -1.0 471,107 + +0.2 471,108 - -0.4 471,108 - -1.0 471,149 - -0.0 471,149 - -1.6 471,157 + +0.1 471,157 + +0.2 471,158 - -0.4 471,158 - -0.8 471,158 - -0.2 471,158 - -0.1 471,158 - -0.2 471,158 - -0.4 471,163 + -0.9 471,164 - -0.6 471,164 - -0.2 471,267 + -0.3 471,267 + +0.1 471,319 + +0.2 471,319 + -0.5 471,319 + -0.3 471,319 + -0.7 471,319 + -0.5 471,319 + +0.2 471,319 + -0.2 471,319 + +0.9 471,319 + -0.1 471,319 + -0.6 471,319 + -0.3 471,319 + +1.4 471,319 + -0.7 471,319 + -1.1 471,319 + -1.1 471,320 - -0.3 471,320 - +0.2 471,320 - -0.5 471,320 - -0.5 471,320 - +0.4 471,320 - +0.1 471,320 - -0.1 471,320 - +1.5 471,320 - -1.2 471,320 - -1.1 471,320 - -0.6 471,320 - +0.0 471,320 - -0.0 471,320 - -0.2 471,320 - -0.5 471,435 + -0.5 471,435 + +0.2 471,436 - -0.1 471,436 - -0.2 471,436 - -0.1 471,495 + -0.3 471,495 + +0.2 471,495 + +0.1 471,495 + +0.5 471,496 - +0.1
Or see this region's nucleotide sequence