Strain Fitness in Variovorax sp. SCN45 around GFF1632

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
233,165	+		GFF1631	0.42	+1.7
233,166	-		GFF1631	0.42	-1.6
233,477	+		GFF1631	0.66	-0.0
233,613	-		GFF1631	0.76	-0.7
233,639	+		GFF1631	0.78	+1.7
233,639	+		GFF1631	0.78	+0.1
234,088	+				-0.4
234,088	+				+1.0
234,097	-				+0.1
234,507	+		GFF1632	0.70	-0.3
234,508	-		GFF1632	0.70	-1.5
234,668	+				-0.8
235,050	-		GFF1633	0.32	-1.3
235,050	-		GFF1633	0.32	+0.2
235,079	+		GFF1633	0.35	+1.2
235,079	+		GFF1633	0.35	-0.9
235,079	+		GFF1633	0.35	-0.8
235,079	+		GFF1633	0.35	-0.6
235,452	+		GFF1633	0.70	-0.9
235,452	+		GFF1633	0.70	-0.4
235,452	+		GFF1633	0.70	-0.7
235,453	-		GFF1633	0.70	+1.1
235,453	-		GFF1633	0.70	-0.2
235,453	-		GFF1633	0.70	+0.1
235,583	+		GFF1633	0.82	+0.8
235,583	+		GFF1633	0.82	+0.2