Strain Fitness in Variovorax sp. SCN45 around GFF1625

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
225,338	+		GFF1624	0.56	-1.3
225,943	+				+0.1
226,234	-		GFF1625	0.23	+1.2
226,670	-		GFF1625	0.74	-1.2
226,825	-				+0.1
226,971	+				-0.3
226,971	+				+0.3
226,972	-				-0.8
227,745	+				-0.3
227,746	-				-0.8
227,820	+		GFF1627	0.14	-0.3
227,820	+		GFF1627	0.14	+0.3
227,869	-		GFF1627	0.17	+2.1