Strain Fitness in Variovorax sp. SCN45 around GFF1412

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
432	+				+0.2
432	+				-0.7
433	-				-0.2
739	-		GFF1412	0.20	-2.2
795	+		GFF1412	0.23	+0.5
976	+		GFF1412	0.31	+0.0
977	-		GFF1412	0.31	+0.5
1,144	+		GFF1412	0.38	+0.4
1,145	-		GFF1412	0.38	+2.0
1,860	-		GFF1412	0.71	+0.2
1,870	+		GFF1412	0.71	-1.2
1,991	-		GFF1412	0.77	-0.3
2,366	+				+0.1
2,650	+				+0.4
2,651	-				+1.4
2,651	-				-0.1
2,654	+				-0.7
2,655	-				-0.7
2,655	-				-0.3
2,668	+				-0.9
2,669	-				+2.0
2,669	-				-0.4
2,877	-		GFF1413	0.22	-0.6
2,993	+		GFF1413	0.28	+0.7
3,134	+		GFF1413	0.37	+0.4
3,273	-		GFF1413	0.45	-0.1