Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF7386 and GFF7387 are separated by 33 nucleotides GFF7387 and GFF7388 are separated by 6 nucleotides GFF7388 and GFF7389 are separated by 107 nucleotides
GFF7386 - no description, at 4,457 to 5,329
GFF7386
GFF7387 - no description, at 5,363 to 5,500
GFF7387
GFF7388 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 5,507 to 6,259
GFF7388
GFF7389 - Cyclohexanone monooxygenase (EC 1.14.13.22), at 6,367 to 7,797
GFF7389
Position (kb) 5
6
7 Strain fitness (log2 ratio) -2
-1
0
1 at 4.667 kb on + strand, within GFF7386 at 4.667 kb on + strand, within GFF7386 at 4.667 kb on + strand, within GFF7386 at 4.717 kb on - strand, within GFF7386 at 4.889 kb on + strand, within GFF7386 at 4.944 kb on - strand, within GFF7386 at 4.944 kb on - strand, within GFF7386 at 5.156 kb on + strand, within GFF7386 at 5.156 kb on + strand, within GFF7386 at 5.157 kb on - strand, within GFF7386 at 5.476 kb on + strand, within GFF7387 at 5.498 kb on + strand at 5.498 kb on + strand at 5.499 kb on - strand at 5.712 kb on + strand, within GFF7388 at 5.712 kb on + strand, within GFF7388 at 5.822 kb on + strand, within GFF7388 at 5.888 kb on - strand, within GFF7388 at 5.960 kb on + strand, within GFF7388 at 6.061 kb on - strand, within GFF7388 at 6.562 kb on + strand, within GFF7389 at 6.562 kb on + strand, within GFF7389 at 6.563 kb on - strand, within GFF7389 at 6.569 kb on - strand, within GFF7389 at 6.587 kb on - strand, within GFF7389 at 6.631 kb on + strand, within GFF7389 at 6.632 kb on - strand, within GFF7389 at 6.632 kb on - strand, within GFF7389 at 6.633 kb on + strand, within GFF7389 at 6.634 kb on - strand, within GFF7389 at 6.634 kb on - strand, within GFF7389 at 6.634 kb on - strand, within GFF7389 at 6.655 kb on + strand, within GFF7389 at 6.656 kb on - strand, within GFF7389 at 6.656 kb on - strand, within GFF7389 at 6.656 kb on - strand, within GFF7389 at 6.789 kb on + strand, within GFF7389 at 6.994 kb on + strand, within GFF7389 at 6.995 kb on - strand, within GFF7389 at 7.133 kb on - strand, within GFF7389
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 4,667 + GFF7386 0.24 -0.8 4,667 + GFF7386 0.24 -0.2 4,667 + GFF7386 0.24 +0.3 4,717 - GFF7386 0.30 +0.1 4,889 + GFF7386 0.49 -0.7 4,944 - GFF7386 0.56 -1.3 4,944 - GFF7386 0.56 +0.4 5,156 + GFF7386 0.80 -0.1 5,156 + GFF7386 0.80 +0.6 5,157 - GFF7386 0.80 -0.6 5,476 + GFF7387 0.82 -0.6 5,498 + -1.6 5,498 + +1.5 5,499 - -0.2 5,712 + GFF7388 0.27 +1.0 5,712 + GFF7388 0.27 -1.1 5,822 + GFF7388 0.42 -0.0 5,888 - GFF7388 0.51 -0.0 5,960 + GFF7388 0.60 -0.2 6,061 - GFF7388 0.74 +0.2 6,562 + GFF7389 0.14 -0.6 6,562 + GFF7389 0.14 -0.6 6,563 - GFF7389 0.14 -2.7 6,569 - GFF7389 0.14 -0.0 6,587 - GFF7389 0.15 -0.3 6,631 + GFF7389 0.18 +0.8 6,632 - GFF7389 0.19 +0.3 6,632 - GFF7389 0.19 +0.9 6,633 + GFF7389 0.19 +0.2 6,634 - GFF7389 0.19 -0.6 6,634 - GFF7389 0.19 -0.3 6,634 - GFF7389 0.19 +0.3 6,655 + GFF7389 0.20 +0.2 6,656 - GFF7389 0.20 +0.8 6,656 - GFF7389 0.20 -0.5 6,656 - GFF7389 0.20 -0.2 6,789 + GFF7389 0.29 +0.4 6,994 + GFF7389 0.44 +0.4 6,995 - GFF7389 0.44 -0.6 7,133 - GFF7389 0.54 -0.5
Or see this region's nucleotide sequence