Strain Fitness in Variovorax sp. SCN45 around GFF7221

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
59	+				+0.2
59	+				-0.2
59	+				+0.5
59	+				-2.2
307	+				+0.2
307	+				-0.9
308	-				-1.1
308	-				-1.3
482	-				+0.3
482	-				-1.0
859	+		GFF7221	0.14	+0.1
1,705	+		GFF7221	0.45	+0.1
1,706	-		GFF7221	0.45	-1.6
1,858	+		GFF7221	0.51	-0.2
2,119	+		GFF7221	0.61	-0.5
2,120	-		GFF7221	0.61	-2.5
2,408	-		GFF7221	0.71	-2.1
3,373	+				-0.4
3,373	+				-2.6
3,373	+				+0.3
3,373	+				-0.5
3,373	+				-0.6
3,373	+				-1.4
3,374	-				+0.2
3,374	-				-0.3
3,674	-		GFF7222	0.23	+0.5
4,001	-		GFF7222	0.47	+0.4
4,150	+		GFF7222	0.57	-0.3
4,151	-		GFF7222	0.57	+0.7