Strain Fitness in Variovorax sp. SCN45 around GFF7216

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
34,161	+				-0.4
34,162	-				+0.7
34,162	-				-0.3
34,701	+		GFF7215	0.62	-0.4
34,781	+		GFF7215	0.71	-0.1
34,781	+		GFF7215	0.71	+0.5
34,781	+		GFF7215	0.71	-0.5
34,782	-		GFF7215	0.71	-1.1
34,782	-		GFF7215	0.71	-1.5
34,782	-		GFF7215	0.71	-0.5
34,932	+		GFF7215	0.88	-0.1
34,933	-		GFF7215	0.88	-0.2
34,933	-		GFF7215	0.88	+0.1
34,933	-		GFF7215	0.88	-1.6
34,933	-		GFF7215	0.88	+0.7
35,118	+				-0.0
35,119	-				+1.0
35,335	+		GFF7216	0.54	-1.6
35,415	+		GFF7216	0.71	+0.7
35,415	+		GFF7216	0.71	-1.9
35,485	-		GFF7216	0.86	-1.2
35,844	-		GFF7217	0.28	+0.8
36,000	+		GFF7217	0.45	+0.6
36,057	-		GFF7217	0.51	+0.1
36,284	+		GFF7217	0.76	-0.7
36,285	-		GFF7217	0.76	-0.7