Strain Fitness in Variovorax sp. SCN45 around GFF7190

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
6,350	+		GFF7189	0.26	+0.8
6,651	-		GFF7189	0.59	+0.4
6,836	+		GFF7189	0.79	-2.1
6,893	+		GFF7189	0.85	-1.4
6,893	+		GFF7189	0.85	-0.5
6,894	-		GFF7189	0.85	-2.7
6,895	+		GFF7189	0.86	-2.1
6,895	+		GFF7189	0.86	-0.5
7,455	+		GFF7190	0.27	+0.2
7,455	+		GFF7190	0.27	+0.0
7,456	-		GFF7190	0.27	-0.5
7,595	+		GFF7190	0.37	-0.6
7,596	-		GFF7190	0.37	-0.5
7,658	+		GFF7190	0.42	+1.3
7,658	+		GFF7190	0.42	-0.2
7,659	-		GFF7190	0.42	+1.0
7,659	-		GFF7190	0.42	-1.3
7,703	+		GFF7190	0.45	+0.4
7,704	-		GFF7190	0.45	-0.2
7,704	-		GFF7190	0.45	-0.0
7,976	+		GFF7190	0.65	-0.1
8,905	+		GFF7191	0.38	-1.4
8,905	+		GFF7191	0.38	-0.4
8,905	+		GFF7191	0.38	-0.8
8,906	-		GFF7191	0.38	+0.1
8,981	-		GFF7191	0.45	-0.4
8,981	-		GFF7191	0.45	-1.1
8,981	-		GFF7191	0.45	+1.9