Strain Fitness in Variovorax sp. SCN45 around GFF6824

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
8,621	-		GFF6823	0.12	-0.7
8,707	+		GFF6823	0.21	-1.0
8,707	+		GFF6823	0.21	-0.5
8,707	+		GFF6823	0.21	-1.4
8,722	+		GFF6823	0.23	+0.7
8,722	+		GFF6823	0.23	-0.7
8,723	-		GFF6823	0.23	-0.3
8,723	-		GFF6823	0.23	+0.8
8,723	-		GFF6823	0.23	+0.3
8,734	+		GFF6823	0.24	-0.9
8,920	+		GFF6823	0.43	-0.7
9,139	+		GFF6823	0.65	-0.5
9,139	+		GFF6823	0.65	-1.4
9,140	-		GFF6823	0.65	-0.0
9,206	-		GFF6823	0.72	+1.1
9,232	+		GFF6823	0.75	-0.9
9,232	+		GFF6823	0.75	-0.8
9,233	-		GFF6823	0.75	-1.1
9,233	-		GFF6823	0.75	-1.2
9,233	-		GFF6823	0.75	+0.8
9,233	-		GFF6823	0.75	-0.2
9,292	+		GFF6823	0.81	+0.5
9,292	+		GFF6823	0.81	-0.2
9,292	+		GFF6823	0.81	+0.3
9,293	-		GFF6823	0.81	+1.3
9,293	-		GFF6823	0.81	-1.9
9,293	-		GFF6823	0.81	-0.9
10,248	+		GFF6824	0.75	-0.1
10,248	+		GFF6824	0.75	-0.2
10,249	-		GFF6824	0.75	-2.0
10,376	+		GFF6824	0.89	-0.4
10,377	-		GFF6824	0.89	-0.7
10,931	-		GFF6825	0.37	+0.3
10,990	+		GFF6825	0.42	-1.0
10,991	-		GFF6825	0.42	-0.3
10,991	-		GFF6825	0.42	+0.7
10,991	-		GFF6825	0.42	+0.3
11,272	+		GFF6825	0.65	+0.8
11,272	+		GFF6825	0.65	+0.6
11,272	+		GFF6825	0.65	-1.7
11,272	+		GFF6825	0.65	+0.3
11,272	+		GFF6825	0.65	-0.1
11,273	-		GFF6825	0.65	-0.5
11,273	-		GFF6825	0.65	-0.9
11,273	-		GFF6825	0.65	-0.9