Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF6809 and GFF6810 are separated by 18 nucleotides GFF6810 and GFF6811 are separated by 119 nucleotides GFF6811 and GFF6812 are separated by 16 nucleotides
GFF6809 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 55,102 to 56,799
GFF6809
GFF6810 - no description, at 56,818 to 57,300
GFF6810
GFF6811 - hypothetical protein, at 57,420 to 57,941
GFF6811
GFF6812 - no description, at 57,958 to 59,622
GFF6812
Position (kb) 56
57
58 Strain fitness (log2 ratio) -2
-1
0
1
2 at 56.072 kb on - strand, within GFF6809 at 56.072 kb on - strand, within GFF6809 at 56.092 kb on + strand, within GFF6809 at 56.092 kb on + strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.093 kb on - strand, within GFF6809 at 56.165 kb on - strand, within GFF6809 at 56.165 kb on - strand, within GFF6809 at 56.177 kb on - strand, within GFF6809 at 56.360 kb on - strand, within GFF6809 at 56.458 kb on + strand, within GFF6809 at 56.458 kb on + strand, within GFF6809 at 56.593 kb on + strand, within GFF6809 at 56.594 kb on - strand, within GFF6809 at 56.695 kb on + strand at 56.695 kb on + strand at 56.695 kb on + strand at 56.695 kb on + strand at 56.696 kb on - strand at 56.696 kb on - strand at 56.696 kb on - strand at 56.819 kb on + strand at 56.819 kb on + strand at 56.820 kb on - strand at 56.909 kb on + strand, within GFF6810 at 56.909 kb on + strand, within GFF6810 at 56.909 kb on + strand, within GFF6810 at 56.910 kb on - strand, within GFF6810 at 56.910 kb on - strand, within GFF6810 at 56.910 kb on - strand, within GFF6810 at 56.999 kb on + strand, within GFF6810 at 57.000 kb on - strand, within GFF6810 at 57.108 kb on - strand, within GFF6810 at 57.164 kb on + strand, within GFF6810 at 57.347 kb on + strand at 57.376 kb on + strand at 57.376 kb on + strand at 57.377 kb on - strand at 57.404 kb on + strand at 57.558 kb on + strand, within GFF6811 at 57.558 kb on + strand, within GFF6811 at 57.558 kb on + strand, within GFF6811 at 57.778 kb on - strand, within GFF6811 at 57.778 kb on - strand, within GFF6811 at 57.783 kb on + strand, within GFF6811 at 57.783 kb on + strand, within GFF6811 at 57.784 kb on - strand, within GFF6811 at 57.784 kb on - strand, within GFF6811 at 58.013 kb on + strand at 58.013 kb on + strand at 58.013 kb on + strand at 58.013 kb on + strand at 58.014 kb on - strand at 58.014 kb on - strand at 58.014 kb on - strand at 58.014 kb on - strand at 58.014 kb on - strand at 58.097 kb on + strand at 58.106 kb on + strand at 58.106 kb on + strand at 58.107 kb on - strand at 58.107 kb on - strand at 58.107 kb on - strand at 58.107 kb on - strand at 58.107 kb on - strand at 58.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL remove 56,072 - GFF6809 0.57 -0.3 56,072 - GFF6809 0.57 -0.6 56,092 + GFF6809 0.58 +0.5 56,092 + GFF6809 0.58 -0.5 56,093 - GFF6809 0.58 -0.2 56,093 - GFF6809 0.58 +0.1 56,093 - GFF6809 0.58 +0.4 56,093 - GFF6809 0.58 -0.3 56,093 - GFF6809 0.58 -0.3 56,093 - GFF6809 0.58 +0.8 56,093 - GFF6809 0.58 -0.3 56,093 - GFF6809 0.58 -0.0 56,093 - GFF6809 0.58 -1.4 56,093 - GFF6809 0.58 -1.7 56,165 - GFF6809 0.63 -0.6 56,165 - GFF6809 0.63 -1.0 56,177 - GFF6809 0.63 +1.4 56,360 - GFF6809 0.74 +0.1 56,458 + GFF6809 0.80 -0.5 56,458 + GFF6809 0.80 +0.3 56,593 + GFF6809 0.88 +0.3 56,594 - GFF6809 0.88 -0.8 56,695 + -0.4 56,695 + -0.5 56,695 + -0.2 56,695 + -0.6 56,696 - -0.8 56,696 - +1.7 56,696 - +0.9 56,819 + -0.2 56,819 + -0.1 56,820 - -0.2 56,909 + GFF6810 0.19 +0.1 56,909 + GFF6810 0.19 -0.9 56,909 + GFF6810 0.19 -0.2 56,910 - GFF6810 0.19 -0.3 56,910 - GFF6810 0.19 -0.3 56,910 - GFF6810 0.19 -0.3 56,999 + GFF6810 0.37 +0.0 57,000 - GFF6810 0.38 -1.4 57,108 - GFF6810 0.60 -0.6 57,164 + GFF6810 0.72 -0.4 57,347 + -0.2 57,376 + -2.6 57,376 + -1.3 57,377 - +1.0 57,404 + +0.1 57,558 + GFF6811 0.26 +0.2 57,558 + GFF6811 0.26 +1.0 57,558 + GFF6811 0.26 -0.4 57,778 - GFF6811 0.69 +0.3 57,778 - GFF6811 0.69 -0.9 57,783 + GFF6811 0.70 +0.2 57,783 + GFF6811 0.70 -0.4 57,784 - GFF6811 0.70 -0.1 57,784 - GFF6811 0.70 -0.9 58,013 + -0.3 58,013 + +0.2 58,013 + -1.0 58,013 + -0.7 58,014 - +1.0 58,014 - -0.6 58,014 - -0.8 58,014 - -0.3 58,014 - +0.4 58,097 + -0.8 58,106 + +1.3 58,106 + -2.2 58,107 - -0.7 58,107 - -0.9 58,107 - +0.4 58,107 - +1.1 58,107 - -1.0 58,107 - +2.4
Or see this region's nucleotide sequence