Strain Fitness in Variovorax sp. SCN45 around GFF4954

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
53,919	-				+0.1
53,922	+				-0.6
53,923	-				+0.2
53,923	-				-1.5
53,923	-				-0.1
54,617	-		GFF4954	0.58	+2.1
54,617	-		GFF4954	0.58	-0.9
54,797	-		GFF4954	0.83	+0.7
54,896	-				-1.6
55,824	+		GFF4955	0.45	+0.4
55,824	+		GFF4955	0.45	+0.3
55,824	+		GFF4955	0.45	+2.2
55,824	+		GFF4955	0.45	-1.9
55,824	+		GFF4955	0.45	-0.4
55,824	+		GFF4955	0.45	-0.9
55,824	+		GFF4955	0.45	-0.1
55,824	+		GFF4955	0.45	+0.3
55,825	-		GFF4955	0.46	-1.2
55,825	-		GFF4955	0.46	-0.2