Strain Fitness in Variovorax sp. SCN45 around GFF4322

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
243,510	+		GFF4321	0.52	+0.9
243,510	+		GFF4321	0.52	+0.5
243,511	-		GFF4321	0.52	+0.9
243,618	+		GFF4321	0.59	-1.5
243,915	+		GFF4321	0.78	-0.3
243,916	-		GFF4321	0.78	-1.0
243,966	+		GFF4321	0.81	-1.9
243,967	-		GFF4321	0.81	-0.0
244,144	-				+0.6
244,400	-				-0.5
244,854	+		GFF4322	0.37	+0.0
245,202	+		GFF4322	0.67	+0.1
245,565	+				-0.2
245,565	+				-0.9