Strain Fitness in Variovorax sp. SCN45 around GFF4306

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
225,250	-				-0.7
225,768	-		GFF4305	0.48	+0.6
226,342	+		GFF4306	0.17	+0.8
226,343	-		GFF4306	0.17	-0.1
226,343	-		GFF4306	0.17	+0.3
226,343	-		GFF4306	0.17	-0.0
226,345	+		GFF4306	0.17	+0.0
226,753	+		GFF4306	0.64	+0.0
226,961	-		GFF4306	0.88	+0.4
227,195	+		GFF4307	0.12	+0.3
227,319	-		GFF4307	0.24	-1.2
227,357	+		GFF4307	0.28	+0.3
227,358	-		GFF4307	0.28	-1.0
227,786	+		GFF4307	0.69	+0.7
227,787	-		GFF4307	0.69	+0.1
227,792	+		GFF4307	0.69	-0.4
227,793	-		GFF4307	0.70	+0.0
227,813	+		GFF4307	0.71	+0.3
227,814	-		GFF4307	0.72	-2.6